Gene
| Gene Model ID | pfu_aug2.0_812.1_07913 |
|---|---|
| Locus | scaffold812.1 : 36037 ... 45375 : - |
| To GenomeBrowser | scaffold812.1:36037..45375 |
| Genes list of scaffold | scaffold812.1 |
| Synonym | pfu_aug1.0_19109.1_47274 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_812.1_07913.t1 | 2 | 1 | polyprenyl_synt | 10 | 101 | 9.7e-25 | 86.8 | 1.2e-23 | 1.8e-19 | 69.6 |
| pfu_aug2.0_812.1_07913.t1 | 2 | 2 | polyprenyl_synt | 134 | 179 | 9.7e-25 | 86.8 | 3.9e-07 | 0.0058 | 15.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_812.1_07913.t1 | gi|676449098|ref|XP_009051945.1| | hypothetical protein LOTGIDRAFT_231541 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_812.1_07913.t1 | gi|704191426|ref|XP_010139069.1| | PREDICTED: farnesyl pyrophosphate synthase, partial [Buceros rhinoceros silvestris] | 0.0 |
| pfu_aug2.0_812.1_07913.t1 | gi|260814652|ref|XP_002602028.1| | hypothetical protein BRAFLDRAFT_123202 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_812.1_07913.t1 | gi|704284070|ref|XP_010157269.1| | PREDICTED: LOW QUALITY PROTEIN: farnesyl pyrophosphate synthase [Eurypyga helias] | 0.0 |
| pfu_aug2.0_812.1_07913.t1 | gi|699640568|ref|XP_009909967.1| | PREDICTED: farnesyl pyrophosphate synthase [Picoides pubescens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_812.1_07913.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_812.1_07913.t1 atgcatacgcatatccagcctgtgaccacgatgaagacggtgacaggtcagtgcctggacttgatcacagcacctgtgaa cagtggtgtagatttcacaaagtttacagaggagagatacgatgctatcgttcagtggaaaacagcgtactactcattct atctccctgtggcactggccatgtgtatggctggaaggacagatgtgaatgaccttgacaaagctcagtctatcttactc attatgggaagatacttccaaatacaggatgatttcctggactgttttggagatccatctgtcactgatctcaggctagt tatacaggcccttcaaaaggtgacaccagaacaaagacatattacaggtaatgaaacaatatactacaggaatgtagatc tcagactcattctagccgttcaaaaggcaacaccagaacaaaaacatatactacaggagaactatgggcaaaaagatcct gaaaaggtgaataaagttaaacagctatatagagacttacaattggaaaaactatttgaagagtttgaagaaaaaagtta caaaaatgtgatatcactgatagagaagaactctggtaatcttcctgtggccatgtttatagaatttgccaacaaaatat ataaaagaaagaaataa |
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Protein
| Protein ID | pfu_aug2.0_812.1_07913.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_812.1_07913.t1 MHTHIQPVTTMKTVTGQCLDLITAPVNSGVDFTKFTEERYDAIVQWKTAYYSFYLPVALAMCMAGRTDVNDLDKAQSILL IMGRYFQIQDDFLDCFGDPSVTDLRLVIQALQKVTPEQRHITGNETIYYRNVDLRLILAVQKATPEQKHILQENYGQKDP EKVNKVKQLYRDLQLEKLFEEFEEKSYKNVISLIEKNSGNLPVAMFIEFANKIYKRKK |
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