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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_812.1_07919
Locus scaffold812.1 : 158588 ... 164525 : -
To GenomeBrowser scaffold812.1:158588..164525
Genes list of scaffold scaffold812.1
Synonym pfu_aug1.0_92736.1_06184

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_812.1_07919.t1 1 1 RWD 23 147 3.8e-15 55.7 8.3e-19 6.1e-15 55.0
pfu_aug2.0_812.1_07919.t1 2 1 DUF1115 141 159 2.0e-20 72.7 0.6 4400.0 -2.8
pfu_aug2.0_812.1_07919.t1 2 2 DUF1115 178 266 2.0e-20 72.7 3.0e-24 2.2e-20 72.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_812.1_07919.t1 gi|676476766|ref|XP_009060899.1| hypothetical protein LOTGIDRAFT_165633 [Lottia gigantea] 0.0
pfu_aug2.0_812.1_07919.t1 gi|524867944|ref|XP_005090779.1| PREDICTED: RWD domain-containing protein 2B-like isoform X1 [Aplysia californica] 0.0
pfu_aug2.0_812.1_07919.t1 gi|291226854|ref|XP_002733405.1| PREDICTED: RWD domain-containing protein 2B-like [Saccoglossus kowalevskii] 0.0
pfu_aug2.0_812.1_07919.t1 gi|514455947|ref|XP_005002550.1| PREDICTED: RWD domain-containing protein 2B isoform X2 [Cavia porcellus] 0.0
pfu_aug2.0_812.1_07919.t1 gi|260837185|ref|XP_002613586.1| hypothetical protein BRAFLDRAFT_208312 [Branchiostoma floridae] 0.0

Transcript
Transcript IDpfu_aug2.0_812.1_07919.t1
Definition-
>pfu_aug2.0_812.1_07919.t1
atgaatgcggggatagattatgaaggtgatgatacggaggacagcacgtcagaaaatgttgccgagttgttggagttaca
gctgtcagagatagagatgctatcaagtatgttcccaaacaaaggagaatttgtcatagacgaccctgctggagttaaaa
atgtacaggaattccttaaaggcagcatcaagtatgagtatctacacagtagactgggatttactatacatgtctcacca
gaaggaactaagctgtctgtagaattggtgtgtaactttccacatgattaccctaatgtatcgcctaccgtctttacacg
ctgtcctctcatgtcacgggaaaatcataaacgtctacaagaggacctgcatcagtacattcaaagtctggatcgtggtg
agatctgtatgtattcagtggtggagtggatccaggaacacgtagaaaactatacacaggaggaagacattcaaagtcca
gtagaaaaaaagcagaaaagggaggaagacggaactttgacacgtttgtggatatacagtcatcatatttatagtaaatt
caaaagaagagatattcttgattgggcaggagaattaaaattgacaggttttagtttgccgggaaaacctggcattatct
gtgccgagggatatagtcgtaatgtagacgaatattggcacagacttaggaacttaaactggaaacgtctttgtgttaaa
gaaaaagaggacaaagaaataggagatgatgatatttctaaacacagaaagtttcccgattttgaggagaaagtttttnt
gttaaataatttttttcaaagtgtacaataa

Protein
Protein IDpfu_aug2.0_812.1_07919.t1
Definition-
>pfu_aug2.0_812.1_07919.t1
MNAGIDYEGDDTEDSTSENVAELLELQLSEIEMLSSMFPNKGEFVIDDPAGVKNVQEFLKGSIKYEYLHSRLGFTIHVSP
EGTKLSVELVCNFPHDYPNVSPTVFTRCPLMSRENHKRLQEDLHQYIQSLDRGEICMYSVVEWIQEHVENYTQEEDIQSP
VEKKQKREEDGTLTRLWIYSHHIYSKFKRRDILDWAGELKLTGFSLPGKPGIICAEGYSRNVDEYWHRLRNLNWKRLCVK
EKEDKEIGDDDISKHRKFPDFEEKVFXLNNFFQSVQ

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