Gene
| Gene Model ID | pfu_aug2.0_812.1_07923 |
|---|---|
| Locus | scaffold812.1 : 197425 ... 205898 : - |
| To GenomeBrowser | scaffold812.1:197425..205898 |
| Genes list of scaffold | scaffold812.1 |
| Synonym | pfu_aug1.0_222.1_50725 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mothers against decapentaplegic homolog 5-like | GO:0001501 GO:0003677 GO:0003700 GO:0005634 GO:0005667 GO:0005737 GO:0006355 GO:0007179 GO:0007420 GO:0009888 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_812.1_07923.t1 | 2 | 1 | MH1 | 36 | 87 | 1.6e-12 | 47.3 | 1.3e-15 | 4.7e-12 | 45.8 |
| pfu_aug2.0_812.1_07923.t1 | 1 | 1 | MH2 | 140 | 316 | 0.0 | 263.2 | 0.0 | 0.0 | 262.9 |
| pfu_aug2.0_812.1_07923.t1 | 2 | 2 | MH1 | 232 | 246 | 1.6e-12 | 47.3 | 3.0 | 11000.0 | -3.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_812.1_07923.t1 | gi|573888395|ref|XP_006631967.1| | PREDICTED: mothers against decapentaplegic homolog 5-like isoform X4 [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_812.1_07923.t1 | gi|573888393|ref|XP_006631966.1| | PREDICTED: mothers against decapentaplegic homolog 5-like isoform X3 [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_812.1_07923.t1 | gi|662183435|ref|XP_008487433.1| | PREDICTED: mothers against decapentaplegic homolog 5-like [Diaphorina citri] | 0.0 |
| pfu_aug2.0_812.1_07923.t1 | gi|694953825|ref|XP_009425158.1| | PREDICTED: mothers against decapentaplegic homolog 9 isoform X3 [Pan troglodytes] | 0.0 |
| pfu_aug2.0_812.1_07923.t1 | gi|676459492|ref|XP_009055318.1| | hypothetical protein LOTGIDRAFT_104873 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_812.1_07923.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_812.1_07923.t1 atgagttcacccatctccagtctcaatagcctcttttccttcaccagccctgctgtgaaacgacttcttggctggaaaca gggggatgaggaggagaaatgggcggagaaagctgtagactcgttagtcaagaagctcaaaaagaagaaaggtgctctgg aggatctagaaaaggccctaagttgtcccggccagcccagtaaatgtgtgaccattcccagatctctagatggtagacta caagtgtcccatcctggaacacctcctccggcctatcagcctcacgatgaaaatcccaacatgggaccgcccaacaatcc aaaccgtaacacacggaatcatcaacccatggacaccatgccctcccaaaccacaggaccaggggggcgtattactgatc tccaaccagtcacataccaggaaccacagtactggtgttctattgtctattatgaactaaataatcgtgtgggtgaagcc ttccatgcatctcagaccagcattgtggtcgatggattcaccgacccctctaataacgcagacaggttctgtctaggact gttgtctaacgttaacaggaattctaccatcgaaaatacacgaagacacatcagcaaaggtgttcatctgtactacgtag gtggtgaggtgtttgccgagtgtctgagtgattccagtatctttgtacagagcagaaactgtaattatcaccatggattc catcctaccactgtgtgtaaaataccaccgggatgcagtctcaaaatattcaacaatcaagaattcgcggctctacttag tcagtcagtgaatcacggcttcgaggcagtctacgaactcactaagatgtgtacaatacgaatgagctttgtcaaagggt ggggtgctgagtatcatcgacaggatgtgaccagtacgccatgttggatcgaaatccatctgaatggacctttacagtgg ctggacaaagtactgacccagatgggctcaccacataacccaatttcatctgtatcatga |
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Protein
| Protein ID | pfu_aug2.0_812.1_07923.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_812.1_07923.t1 MSSPISSLNSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDSLVKKLKKKKGALEDLEKALSCPGQPSKCVTIPRSLDGRL QVSHPGTPPPAYQPHDENPNMGPPNNPNRNTRNHQPMDTMPSQTTGPGGRITDLQPVTYQEPQYWCSIVYYELNNRVGEA FHASQTSIVVDGFTDPSNNADRFCLGLLSNVNRNSTIENTRRHISKGVHLYYVGGEVFAECLSDSSIFVQSRNCNYHHGF HPTTVCKIPPGCSLKIFNNQEFAALLSQSVNHGFEAVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLNGPLQW LDKVLTQMGSPHNPISSVS |
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