Gene
| Gene Model ID | pfu_aug2.0_814.1_14573 |
|---|---|
| Locus | scaffold814.1 : 586 ... 13145 : - |
| To GenomeBrowser | scaffold814.1:586..13145 |
| Genes list of scaffold | scaffold814.1 |
| Synonym | pfu_aug1.0_81021.1_20545 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_814.1_14573.t1 | 4 | 1 | zf-H2C2_2 | 481 | 504 | 3.0e-13 | 49.3 | 6.8e-07 | 0.00056 | 20.0 |
| pfu_aug2.0_814.1_14573.t1 | 4 | 1 | zf-Di19 | 481 | 517 | 1.2e-06 | 28.5 | 0.0063 | 5.2 | 7.2 |
| pfu_aug2.0_814.1_14573.t1 | 3 | 1 | zf-C2H2_6 | 494 | 519 | 2.9e-06 | 26.9 | 0.00083 | 0.68 | 9.9 |
| pfu_aug2.0_814.1_14573.t1 | 3 | 1 | zf-C2H2 | 495 | 517 | 1.7e-15 | 56.3 | 2.6e-08 | 2.1e-05 | 24.5 |
| pfu_aug2.0_814.1_14573.t1 | 3 | 1 | zf-C2H2_4 | 495 | 517 | 9.1e-10 | 38.1 | 0.0003 | 0.25 | 11.7 |
| pfu_aug2.0_814.1_14573.t1 | 3 | 1 | zf-C2H2_jaz | 495 | 515 | 3.6e-08 | 33.3 | 0.00057 | 0.47 | 10.6 |
| pfu_aug2.0_814.1_14573.t1 | 4 | 2 | zf-H2C2_2 | 509 | 532 | 3.0e-13 | 49.3 | 2.8e-08 | 2.3e-05 | 24.4 |
| pfu_aug2.0_814.1_14573.t1 | 4 | 2 | zf-Di19 | 522 | 576 | 1.2e-06 | 28.5 | 1.3e-07 | 0.00011 | 22.2 |
| pfu_aug2.0_814.1_14573.t1 | 3 | 2 | zf-C2H2 | 523 | 546 | 1.7e-15 | 56.3 | 5.1e-08 | 4.2e-05 | 23.6 |
| pfu_aug2.0_814.1_14573.t1 | 3 | 2 | zf-C2H2_4 | 523 | 546 | 9.1e-10 | 38.1 | 2.4e-07 | 0.0002 | 21.4 |
| pfu_aug2.0_814.1_14573.t1 | 3 | 2 | zf-C2H2_jaz | 523 | 544 | 3.6e-08 | 33.3 | 0.0017 | 1.4 | 9.1 |
| pfu_aug2.0_814.1_14573.t1 | 3 | 2 | zf-C2H2_6 | 523 | 536 | 2.9e-06 | 26.9 | 0.0065 | 5.4 | 7.0 |
| pfu_aug2.0_814.1_14573.t1 | 4 | 3 | zf-H2C2_2 | 537 | 562 | 3.0e-13 | 49.3 | 4.6e-05 | 0.038 | 14.3 |
| pfu_aug2.0_814.1_14573.t1 | 4 | 3 | zf-Di19 | 552 | 577 | 1.2e-06 | 28.5 | 8.2e-05 | 0.067 | 13.3 |
| pfu_aug2.0_814.1_14573.t1 | 3 | 3 | zf-C2H2_6 | 552 | 572 | 2.9e-06 | 26.9 | 1.1e-05 | 0.0088 | 15.9 |
| pfu_aug2.0_814.1_14573.t1 | 3 | 3 | zf-C2H2 | 553 | 575 | 1.7e-15 | 56.3 | 1.1e-05 | 0.0088 | 16.3 |
| pfu_aug2.0_814.1_14573.t1 | 3 | 3 | zf-C2H2_4 | 553 | 575 | 9.1e-10 | 38.1 | 0.00054 | 0.44 | 10.9 |
| pfu_aug2.0_814.1_14573.t1 | 3 | 3 | zf-C2H2_jaz | 553 | 573 | 3.6e-08 | 33.3 | 2.0e-05 | 0.016 | 15.3 |
| pfu_aug2.0_814.1_14573.t1 | 4 | 4 | zf-H2C2_2 | 568 | 576 | 3.0e-13 | 49.3 | 3.7 | 3100.0 | -1.3 |
| pfu_aug2.0_814.1_14573.t1 | 4 | 4 | zf-Di19 | 580 | 595 | 1.2e-06 | 28.5 | 5.5 | 4600.0 | -2.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_814.1_14573.t1 | gi|524870852|ref|XP_005092206.1| | PREDICTED: chitinase-like protein PB1E7.04c-like isoform X1 [Aplysia californica] | 1.0e-38 |
| pfu_aug2.0_814.1_14573.t1 | gi|585666693|ref|XP_006817160.1| | PREDICTED: zinc finger protein 629-like [Saccoglossus kowalevskii] | 5.0e-38 |
| pfu_aug2.0_814.1_14573.t1 | gi|242002386|ref|XP_002435836.1| | zinc finger protein, putative [Ixodes scapularis] | 2.0e-35 |
| pfu_aug2.0_814.1_14573.t1 | gi|676468443|ref|XP_009058210.1| | hypothetical protein LOTGIDRAFT_86781, partial [Lottia gigantea] | 1.0e-32 |
| pfu_aug2.0_814.1_14573.t1 | gi|583999467|ref|XP_006794803.1| | PREDICTED: nuclear receptor coactivator 2-like [Neolamprologus brichardi] | 9.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_814.1_14573.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_814.1_14573.t1 atggatatcggatgtggtatggagttccagttccctgtgtctaaccatttgcctgagtttggtgagactgcttcaggaat acatgataagttagacttgggtcctggacaactactggattcagtgtctgtgaccgcaccttgtgccgaccatgatgggt cagataaacacctgaccgctgctgacttcaagttagacttgggacctgctaatgatctagtatccagtgtagatttccat ttagaaacttctgtgtctgatatatcctctgaatctacgacagtgcccagacaagtgtcagtctgtcacggtggcaacat catctcagctggcacggacagactgccacagaaccaaatcgtgcagatactaaatactcaaaataatacctctcaatttc caagtcctactcccttgcttaatcagcgtgtaaaactagctcaaacaagtgtcaaagttcagccttcttattctcctgat gccaccgttagcagtatattgaagaaccgagatggtcggttagtgtcgccatgtacgagttataaccatgataatgagga tgttgtaccgtctagcacaagcagtttcacaactgataatgtaccatgtgaaaatgtgatgtctttaaatgcaaacgctg ttgctcatcagattaataattgcagcagtggaatacaaggaactgatgtgtctgaaaatgaaacacattctcaaaagaat accaaaattcttgtgtatggtaaaaatattgccttgacatttgattgccgaaatcagaaaaatgtcatgaattctatagc aaaagccatgagcagccctccaactgttgtgacaaaagaaggagtagaagatgagtccataggaaataatgaagatgttt tctcttcagcttcatctaaaacacttgaaaattcttttgttgacactgataaacaacagaacatcatagagagtaatcta cagaatattaagtatgtatcaatattaaagaatgcagcaaattccttggtttcccatcctataatggaatcaagtgcaag taatatgaacagcagtacctccaagactgtaggtaatgaaaatgaaatctcattggatgatccagacttgagaaatcctg atgtaagcaaagcaagtgatacttgtgcaaatactgatttgatcaatgaacacactgcaaatcaatcagcgatagaaata gcgtgtcaaaaactagagaaggtgacaaatggaggatcgagtggcccgggtctggaggagggcatccagtcatatcatac gcagatagatgataatgatgatgaacctcatgttggcaagaggatgaaaatgacaccatcatcatctgaggaaaaaaacg aaaatgttgtgatttccgtgtcaaaattcactgagatggaagaaaatgacaaaggatcagattatacctttagctgtgat ctgtatgtacatgttatacactatcacacaaaccagcaaccatacaagtgttctgtatgtggaaaaggatacataagaaa cagtgacctagttgtccatatgagattccataagaaggagagggctttcacctgtacctactgtcagaagtctttctttc aatctggtgatttgaatcggcacatacggagcctacatcagtcagcatccctgttgaagtgtggtcactgtaacagacaa tattccaaggaggccactctgatacgacacatgcagacagcacacagtgatatcatacaaaaatcactacaggagaaata tgaactggagcatagtcaagagatgcggtgcagtgcacattga |
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Protein
| Protein ID | pfu_aug2.0_814.1_14573.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_814.1_14573.t1 MDIGCGMEFQFPVSNHLPEFGETASGIHDKLDLGPGQLLDSVSVTAPCADHDGSDKHLTAADFKLDLGPANDLVSSVDFH LETSVSDISSESTTVPRQVSVCHGGNIISAGTDRLPQNQIVQILNTQNNTSQFPSPTPLLNQRVKLAQTSVKVQPSYSPD ATVSSILKNRDGRLVSPCTSYNHDNEDVVPSSTSSFTTDNVPCENVMSLNANAVAHQINNCSSGIQGTDVSENETHSQKN TKILVYGKNIALTFDCRNQKNVMNSIAKAMSSPPTVVTKEGVEDESIGNNEDVFSSASSKTLENSFVDTDKQQNIIESNL QNIKYVSILKNAANSLVSHPIMESSASNMNSSTSKTVGNENEISLDDPDLRNPDVSKASDTCANTDLINEHTANQSAIEI ACQKLEKVTNGGSSGPGLEEGIQSYHTQIDDNDDEPHVGKRMKMTPSSSEEKNENVVISVSKFTEMEENDKGSDYTFSCD LYVHVIHYHTNQQPYKCSVCGKGYIRNSDLVVHMRFHKKERAFTCTYCQKSFFQSGDLNRHIRSLHQSASLLKCGHCNRQ YSKEATLIRHMQTAHSDIIQKSLQEKYELEHSQEMRCSAH |
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