Gene
| Gene Model ID | pfu_aug2.0_814.1_14576 |
|---|---|
| Locus | scaffold814.1 : 28423 ... 95305 : - |
| To GenomeBrowser | scaffold814.1:28423..95305 |
| Genes list of scaffold | scaffold814.1 |
| Synonym | pfu_aug1.0_2784.1_51794 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_814.1_14576.t1 | 2 | 1 | SUV3_C | 59 | 70 | 6.4e-12 | 44.7 | 3.6 | 13000.0 | -4.4 |
| pfu_aug2.0_814.1_14576.t1 | 2 | 1 | Helicase_C | 208 | 234 | 1.0e-11 | 44.5 | 0.95 | 3500.0 | -2.1 |
| pfu_aug2.0_814.1_14576.t1 | 2 | 2 | Helicase_C | 393 | 488 | 1.0e-11 | 44.5 | 1.0e-14 | 3.9e-11 | 42.6 |
| pfu_aug2.0_814.1_14576.t1 | 2 | 2 | SUV3_C | 642 | 682 | 6.4e-12 | 44.7 | 1.7e-15 | 6.4e-12 | 44.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_814.1_14576.t1 | gi|157116275|ref|XP_001658414.1| | AAEL007512-PA [Aedes aegypti] | 0.0 |
| pfu_aug2.0_814.1_14576.t1 | gi|751797553|ref|XP_011208647.1| | PREDICTED: ATP-dependent RNA helicase SUV3 homolog, mitochondrial [Bactrocera dorsalis] | 0.0 |
| pfu_aug2.0_814.1_14576.t1 | gi|751454782|ref|XP_011181881.1| | PREDICTED: ATP-dependent RNA helicase SUV3 homolog, mitochondrial [Bactrocera cucurbitae] | 0.0 |
| pfu_aug2.0_814.1_14576.t1 | gi|195394872|ref|XP_002056063.1| | GJ10732 [Drosophila virilis] | 0.0 |
| pfu_aug2.0_814.1_14576.t1 | gi|524870799|ref|XP_005092180.1| | PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like isoform X1 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_814.1_14576.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_814.1_14576.t1 atgtctagcgtatgtttaaggtcaatatgcttgacctcggtcaatgttggagggagatgctggagaagatggatacattc ttcaagtactttaagtaaaaaccgacatcaacgacggacagcattgccaaccactgttggaaaaactaaaccaactaact ctacgaaaaaaaaggctaaaactgatatacagaaaatcatcactgatatagttgatgcaagggagtaccagaagcctgtt ggtcaagacggaatgggcgaagagattactggcagtaaattaaagctttttgatgtgatgaatgcattgaattacttcaa acataaagatactgttcgaatggttcttaaggagaatggaatcaaagaggaggccttgtttaatagaatattgatgagtt tccgtcattatattcgcaataatataagaggactgccaccggatcttcatgtattactaagtgatctaacaatccaccaa aaaggtagtgtagatggtttggtgccatattttctaaatcatgccttagaaatatttcctcatctggagtttatggacga tctgaaaaacacatctgacctatcaaagccagctaattggtacatggctgccagagaattgaatcgcaaaataatctttc atgcagggcctacaaacagtgggaaaacttatcatgccttacaaaggttcaaggaggctgaacgggcgttatactgtggt cctttacgtatgttagcccaggaggtctataagagaaccaatgaggagggtatagaatgtgacctacttactggagagga gaggctttttgtggacccagatgaaaatccagccaatcatttgtcctgtactgtagagactgcaagtgtatatgctcatt atgatgtagctgtaatagatgagatacagatgatacgtgattctcaacggggctcggcatggacaagggttttacttggg ctatgtgccaatgagatccatgtatgtggagaggcttcagctatccccattgtaaggaatataacagaaaccactggtga tgaattcgagattaaagagtatggaagacttacaaaattggagatgtctgaaaaacctgttgaatcatttacaaatatac agccaggtgattgtatagtaacattcagcaaaaaagacatttatgcagtatgtcaggagctagagaaaataggaaaggat gctgctgtaatatatggtggtcttcctccagcaaccaagcgagctcaggcagaaatttttaacgatccagaccattcctg taaaatcctcgtggccacagatgctattggaatgggattaaatctgaacataaaaaggatagtattttattcagtaaaga agatagatatagctcatcaagaggatggttcctgtcttcgcaaattggcaaatataagcacttctcaagctctacagata gcgggtagggcaggcagatttggcactgaatatgaagatggtgaatacacaacattccatgctaatgattaccacaaact ccaggaaatcttgaggaaacaagtcgagccattattacttgcaggtttaaaacccagtgcagatcaggtggaaactttct cttactttatgggaaattcatcaatgaaacaagttttggaagtcttttacaacattactactgtagatgacacaaactac ttcctttgtgaaatgtccaattttaaggcactaagtagtgtaattgaagacgttgagatgactctacgtatgaagtattt cttttgttctgccccagtcagtattaaggatggagcattcatctcttcaatttttttgatgtattcacgacgttgcagta agggaattcctacaacatttgactttgtttgtcaaagaactggccatccttataaatacccagagtcccttgatgaacaa atggtattagaacaaacttatgatgcactggacctctatctttggttaagctatcgttttgtggacatgttcccagacag attggaggtgaaacttctgagagatgagctagagccggttattctccatggtatacgcaatttgacaaaacttttcacta gcacagacaagacagaccagaagaaatcgaggaaatag |
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Protein
| Protein ID | pfu_aug2.0_814.1_14576.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_814.1_14576.t1 MSSVCLRSICLTSVNVGGRCWRRWIHSSSTLSKNRHQRRTALPTTVGKTKPTNSTKKKAKTDIQKIITDIVDAREYQKPV GQDGMGEEITGSKLKLFDVMNALNYFKHKDTVRMVLKENGIKEEALFNRILMSFRHYIRNNIRGLPPDLHVLLSDLTIHQ KGSVDGLVPYFLNHALEIFPHLEFMDDLKNTSDLSKPANWYMAARELNRKIIFHAGPTNSGKTYHALQRFKEAERALYCG PLRMLAQEVYKRTNEEGIECDLLTGEERLFVDPDENPANHLSCTVETASVYAHYDVAVIDEIQMIRDSQRGSAWTRVLLG LCANEIHVCGEASAIPIVRNITETTGDEFEIKEYGRLTKLEMSEKPVESFTNIQPGDCIVTFSKKDIYAVCQELEKIGKD AAVIYGGLPPATKRAQAEIFNDPDHSCKILVATDAIGMGLNLNIKRIVFYSVKKIDIAHQEDGSCLRKLANISTSQALQI AGRAGRFGTEYEDGEYTTFHANDYHKLQEILRKQVEPLLLAGLKPSADQVETFSYFMGNSSMKQVLEVFYNITTVDDTNY FLCEMSNFKALSSVIEDVEMTLRMKYFFCSAPVSIKDGAFISSIFLMYSRRCSKGIPTTFDFVCQRTGHPYKYPESLDEQ MVLEQTYDALDLYLWLSYRFVDMFPDRLEVKLLRDELEPVILHGIRNLTKLFTSTDKTDQKKSRK |
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