Gene
| Gene Model ID | pfu_aug2.0_814.1_14578 |
|---|---|
| Locus | scaffold814.1 : 117686 ... 135762 : + |
| To GenomeBrowser | scaffold814.1:117686..135762 |
| Genes list of scaffold | scaffold814.1 |
| Synonym | pfu_aug1.0_2784.1_51797 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_814.1_14578.t1 | 14 | 1 | GCC2_GCC3 | 3 | 28 | 2.8026e-45 | 151.7 | 3.0e-06 | 0.009 | 15.5 |
| pfu_aug2.0_814.1_14578.t1 | 11 | 1 | NCD3G | 6 | 45 | 7.3e-21 | 73.6 | 2.9e-05 | 0.087 | 12.5 |
| pfu_aug2.0_814.1_14578.t1 | 14 | 2 | GCC2_GCC3 | 17 | 46 | 2.8026e-45 | 151.7 | 5.7e-08 | 0.00017 | 21.0 |
| pfu_aug2.0_814.1_14578.t1 | 14 | 3 | GCC2_GCC3 | 27 | 62 | 2.8026e-45 | 151.7 | 1.3e-08 | 3.8e-05 | 23.1 |
| pfu_aug2.0_814.1_14578.t1 | 11 | 2 | NCD3G | 41 | 78 | 7.3e-21 | 73.6 | 4.3e-06 | 0.013 | 15.2 |
| pfu_aug2.0_814.1_14578.t1 | 14 | 4 | GCC2_GCC3 | 44 | 80 | 2.8026e-45 | 151.7 | 9.8e-10 | 2.9e-06 | 26.7 |
| pfu_aug2.0_814.1_14578.t1 | 11 | 3 | NCD3G | 73 | 113 | 7.3e-21 | 73.6 | 1.6e-07 | 0.00047 | 19.8 |
| pfu_aug2.0_814.1_14578.t1 | 14 | 5 | GCC2_GCC3 | 78 | 119 | 2.8026e-45 | 151.7 | 2.5e-11 | 7.4e-08 | 31.8 |
| pfu_aug2.0_814.1_14578.t1 | 11 | 4 | NCD3G | 108 | 147 | 7.3e-21 | 73.6 | 5.0e-08 | 0.00015 | 21.4 |
| pfu_aug2.0_814.1_14578.t1 | 14 | 6 | GCC2_GCC3 | 117 | 147 | 2.8026e-45 | 151.7 | 3.4e-06 | 0.01 | 15.4 |
| pfu_aug2.0_814.1_14578.t1 | 11 | 5 | NCD3G | 143 | 183 | 7.3e-21 | 73.6 | 8.2e-06 | 0.024 | 14.3 |
| pfu_aug2.0_814.1_14578.t1 | 14 | 7 | GCC2_GCC3 | 146 | 181 | 2.8026e-45 | 151.7 | 2.2e-07 | 0.00065 | 19.2 |
| pfu_aug2.0_814.1_14578.t1 | 14 | 8 | GCC2_GCC3 | 180 | 216 | 2.8026e-45 | 151.7 | 5.9e-09 | 1.8e-05 | 24.2 |
| pfu_aug2.0_814.1_14578.t1 | 11 | 6 | NCD3G | 190 | 215 | 7.3e-21 | 73.6 | 8.8e-06 | 0.026 | 14.2 |
| pfu_aug2.0_814.1_14578.t1 | 11 | 7 | NCD3G | 229 | 243 | 7.3e-21 | 73.6 | 0.2 | 580.0 | 0.3 |
| pfu_aug2.0_814.1_14578.t1 | 14 | 9 | GCC2_GCC3 | 233 | 246 | 2.8026e-45 | 151.7 | 0.021 | 62.0 | 3.2 |
| pfu_aug2.0_814.1_14578.t1 | 11 | 8 | NCD3G | 252 | 276 | 7.3e-21 | 73.6 | 0.011 | 33.0 | 4.3 |
| pfu_aug2.0_814.1_14578.t1 | 14 | 10 | GCC2_GCC3 | 253 | 288 | 2.8026e-45 | 151.7 | 0.00014 | 0.42 | 10.2 |
| pfu_aug2.0_814.1_14578.t1 | 11 | 9 | NCD3G | 268 | 309 | 7.3e-21 | 73.6 | 3.0e-05 | 0.088 | 12.5 |
| pfu_aug2.0_814.1_14578.t1 | 14 | 11 | GCC2_GCC3 | 274 | 308 | 2.8026e-45 | 151.7 | 1.1e-07 | 0.00032 | 20.2 |
| pfu_aug2.0_814.1_14578.t1 | 14 | 12 | GCC2_GCC3 | 291 | 334 | 2.8026e-45 | 151.7 | 8.9e-07 | 0.0026 | 17.2 |
| pfu_aug2.0_814.1_14578.t1 | 11 | 10 | NCD3G | 316 | 343 | 7.3e-21 | 73.6 | 0.0017 | 4.9 | 6.9 |
| pfu_aug2.0_814.1_14578.t1 | 14 | 13 | GCC2_GCC3 | 335 | 373 | 2.8026e-45 | 151.7 | 3.5e-12 | 1.0e-08 | 34.5 |
| pfu_aug2.0_814.1_14578.t1 | 11 | 11 | NCD3G | 338 | 377 | 7.3e-21 | 73.6 | 7.1e-06 | 0.021 | 14.5 |
| pfu_aug2.0_814.1_14578.t1 | 14 | 14 | GCC2_GCC3 | 368 | 405 | 2.8026e-45 | 151.7 | 0.00094 | 2.8 | 7.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_814.1_14578.t1 | gi|676446092|ref|XP_009050966.1| | hypothetical protein LOTGIDRAFT_187351, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_814.1_14578.t1 | gi|156406717|ref|XP_001641191.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_814.1_14578.t1 | gi|524866788|ref|XP_005090211.1| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_814.1_14578.t1 | gi|471203725|ref|XP_004258671.1| | hypothetical protein EIN_398300 [Entamoeba invadens IP1] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_814.1_14578.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_814.1_14578.t1 atgcctaattgtacaaattgttcagcaggatattttgccaatgtaacgggtctttcctcttgttacccctgtgaaggggg aacatatcaaaacctgacaggtcaagaacattgtcctctgtgtagaaagggaacataccaagatgaggaacatcaaagtg catgtaagttctgtgatccaggaacatatcagaacagatctggccagttagaatgtgagaaatgtagaccggggacattc cagaacagggagggaatggcgctttgtgaggtatgtcatgcaggggaatatcagaatgaagaaggacagaagtcttgtat aaagtgccctcctggtatgcaccaacaacaggagggccaaactgcatgtgtggaatgtagtccaggggagtacagtaaca tcagtggacaagctaattgtaaaaaatgtcgttctggaacatatcaagataagacaaaccaatcttcatgtatgaagtgt gatgctggaacacatcagaataaagagggccaaacgtcctgctttggctgcactgccgggcattatagcaatgtcagtgg agaatctgagtgtatgaaatgtaaacctggaacattccaagacaaagaaaaccagacatcttgtacagaatgccctgtgg ataagtactgcaacaacactacaggtcaggtagattgtcctatttgtactccaggtaagtgtcgtgctggtacctatggc aacactacaggtcaggttgtcctatttgtactccaggtgtgtcctgctggtacctatggtaatactacaggtcaggtaga ttctcctgtttgtacaccaggatcatactccagtgcaaatggttcattgtcatgtacacaatgtacaaagggatggtatc aagacaaagaaaacaaaacaggctgtcttccatgtgatctagggtcgtattgcaatgaccttggatgtgagaaatgtttt ccgtgtgctgctggccatgacacacaagaattaaacagtaccttctgtacagagtgtatgaaaggtacatacaaggacag agaaggcttttcagtgtgttcaccatgtcctgatgggtattttactgtcaaactgggatcaagatcttgtaccgaatgtc ctagaggatattattgcccagtagcatgggaggatcctgttctatgtcccccaggaggtatctgtccctctggcagctcc taccctgatgcttgtgatctgcctttctttgctgctgacagatctacagagcaatgtaacccaacagaggaactgattgc cctcatagtaggctgtggagttaaactcggagagagaatagaagaatatgtgatataa |
|
Protein
| Protein ID | pfu_aug2.0_814.1_14578.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_814.1_14578.t1 MPNCTNCSAGYFANVTGLSSCYPCEGGTYQNLTGQEHCPLCRKGTYQDEEHQSACKFCDPGTYQNRSGQLECEKCRPGTF QNREGMALCEVCHAGEYQNEEGQKSCIKCPPGMHQQQEGQTACVECSPGEYSNISGQANCKKCRSGTYQDKTNQSSCMKC DAGTHQNKEGQTSCFGCTAGHYSNVSGESECMKCKPGTFQDKENQTSCTECPVDKYCNNTTGQVDCPICTPGKCRAGTYG NTTGQVVLFVLQVCPAGTYGNTTGQVDSPVCTPGSYSSANGSLSCTQCTKGWYQDKENKTGCLPCDLGSYCNDLGCEKCF PCAAGHDTQELNSTFCTECMKGTYKDREGFSVCSPCPDGYFTVKLGSRSCTECPRGYYCPVAWEDPVLCPPGGICPSGSS YPDACDLPFFAADRSTEQCNPTEELIALIVGCGVKLGERIEEYVI |
|