Gene
| Gene Model ID | pfu_aug2.0_815.1_17852 |
|---|---|
| Locus | scaffold815.1 : 62832 ... 86025 : - |
| To GenomeBrowser | scaffold815.1:62832..86025 |
| Genes list of scaffold | scaffold815.1 |
| Synonym | pfu_aug1.0_3902.1_44817 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_815.1_17852.t1 | 2 | 1 | Transglut_N | 118 | 250 | 9.2e-25 | 86.9 | 1.5e-27 | 3.3e-24 | 85.2 |
| pfu_aug2.0_815.1_17852.t1 | 1 | 1 | Transglut_core | 366 | 455 | 8.6e-15 | 54.9 | 1.1e-17 | 2.4e-14 | 53.5 |
| pfu_aug2.0_815.1_17852.t1 | 2 | 1 | Transglut_C | 593 | 693 | 8.1e-14 | 51.5 | 1.5e-06 | 0.0031 | 17.5 |
| pfu_aug2.0_815.1_17852.t1 | 2 | 2 | Transglut_C | 703 | 790 | 8.1e-14 | 51.5 | 5.4e-11 | 1.1e-07 | 31.7 |
| pfu_aug2.0_815.1_17852.t1 | 2 | 2 | Transglut_N | 732 | 753 | 9.2e-25 | 86.9 | 2.6 | 5500.0 | -2.7 |
Transcript
| Transcript ID | pfu_aug2.0_815.1_17852.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_815.1_17852.t1 atgtatactcaaatgtaccgtaatggtaccttcacagataatgtcacattcctggctggagcgggtgcagggcctaaagg agggcataaaggtaaaggtggaccaaaaggaggtccgaaagacggtccgaaaggcggaccaaaaggaccgggtaaaagaa ggaaaggaccaaagaaaattctgaagtacggagaaaaacggaagcgagaatattcatgggcgagagatgtgcggctgatg gccagggtgattggtgccttaaagggtttactttcagacgacgaggaagaagaagaagcaccagttccaccagtaataga agaggcaccggaagaagtacttgacaaagagctccatgtgaagggagttgcccttaacatcaatgtcaataccatagccc acaaaactgacaaatatgaacggacgaagatccggtcatctccggaggagggcgtgctccgaccggaactggtggtccga agaggaaaagagttcaacattaaggtcaccttcaatgatgaatacaactgtgatttgcatgatctggaatttacctttac acttggtaaaaatccttctccgatgaacggcaccctagtttcttgttatatggacgaaaccggaaagaaaagcgatgact ctgcagaatggtccgtccgtatcatggacaccgtgggcaaagatctgtacgtcggcataacaccaccttgcgactgtatg atcggcgaatggaacatgttcattgtcaccatctctaaaatgaaagacggagaggttggattgcagtatgaacacgagga agatattactgtgttgttgaatccatggtgcaaagatgatccagtttacatggaaaatcagtccttgttggacgagtaca ttttgaacgattacggagcggtttactgtggtaactggcgccagattggatgcaggccctggttctttgctcaggtcaat aactgtgacgatggaggtgcgttggtgggaaactggagcggtaactatgaaggagggaagagccccacccactgggttgg ctcagagaggattctcagacaatactaccgtactgacggcgaaccagtatgttttgggcaatgttgggtgttttcggcag ttgtcgtcacagtgtgtcgcgccattggtcttccatgtaggagcgtcacaaacttcgcttctgctcatgacaccgacaaa agtatgaccatagacagtgtatatgaggaatgtgaagacggctcattaaaccacctaccagagttatcatctgattcggt gtggaatttccatgtgtggaacgaagtatggacagcccgatgtgaccttgaaccagggtttgatggttggcaggtgatcg atgccacaccccaggagaggagcgaagggcttttcgtctgtggtccaagtcccttggcagcaataaagaagggattaatt ggcattggatatgatacagcttttataatggctgaagtcaattcggacaaaataagatataaatacgataggcaaacaga ggaatataccaaaattagtgttgaacgagactctgttggaagaaatataagtaccaaaattcccgacgggaaacccttca acgataatttatcgtggatggcgttcaaattacgggaagatctcacagattgttacaaatttaaggaggggtcagatgag gagaggaaagcagtaatgacagcaaacttggcatcaaaagatccgagaaacattgtagataatccagaaaaggatgttga aataacattagttgacaacgatcacaagatggttggagaggattttgaggtggagatcctagttaaaaacgtctgcaagg aaaaagagccgaggactgtatctgtgcttcagtgtgatattgaaatgaagagttaccaaggtcactccgtgtcaaaggtc aaacatgtagtagagaaagatattgccctgaagcctgatgaagaaaagtctgtaaaaataaaagtggaaggaaaggagta cgttgatagcttgattgaacaagccgccatgggaatagatgttgcagcgatagtaaaggaaaccaggcgaatcgcaatta agtcggacgacttccgtctgagacgaccagatttggagttatcggtccctgataagattaagaaggacattccttttaat gtaactgttagcctgaagaacaccatgcccaaggatctgactggagttgaaattgacttcgatggagttaaaggggaagg cgagtttgaagtgggaaccatcaaagccaattccgaatggaagggtgaattccagatcgccgtgaagagatctggccaac atcaaatatcagcaagtctcgactctaaggaactgaaagacatcactggttgtatttgcatggacattgataagtaa |
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Protein
| Protein ID | pfu_aug2.0_815.1_17852.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_815.1_17852.t1 MYTQMYRNGTFTDNVTFLAGAGAGPKGGHKGKGGPKGGPKDGPKGGPKGPGKRRKGPKKILKYGEKRKREYSWARDVRLM ARVIGALKGLLSDDEEEEEAPVPPVIEEAPEEVLDKELHVKGVALNINVNTIAHKTDKYERTKIRSSPEEGVLRPELVVR RGKEFNIKVTFNDEYNCDLHDLEFTFTLGKNPSPMNGTLVSCYMDETGKKSDDSAEWSVRIMDTVGKDLYVGITPPCDCM IGEWNMFIVTISKMKDGEVGLQYEHEEDITVLLNPWCKDDPVYMENQSLLDEYILNDYGAVYCGNWRQIGCRPWFFAQVN NCDDGGALVGNWSGNYEGGKSPTHWVGSERILRQYYRTDGEPVCFGQCWVFSAVVVTVCRAIGLPCRSVTNFASAHDTDK SMTIDSVYEECEDGSLNHLPELSSDSVWNFHVWNEVWTARCDLEPGFDGWQVIDATPQERSEGLFVCGPSPLAAIKKGLI GIGYDTAFIMAEVNSDKIRYKYDRQTEEYTKISVERDSVGRNISTKIPDGKPFNDNLSWMAFKLREDLTDCYKFKEGSDE ERKAVMTANLASKDPRNIVDNPEKDVEITLVDNDHKMVGEDFEVEILVKNVCKEKEPRTVSVLQCDIEMKSYQGHSVSKV KHVVEKDIALKPDEEKSVKIKVEGKEYVDSLIEQAAMGIDVAAIVKETRRIAIKSDDFRLRRPDLELSVPDKIKKDIPFN VTVSLKNTMPKDLTGVEIDFDGVKGEGEFEVGTIKANSEWKGEFQIAVKRSGQHQISASLDSKELKDITGCICMDIDK |
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