Gene
| Gene Model ID | pfu_aug2.0_815.1_17857 |
|---|---|
| Locus | scaffold815.1 : 155490 ... 158245 : - |
| To GenomeBrowser | scaffold815.1:155490..158245 |
| Genes list of scaffold | scaffold815.1 |
| Synonym | pfu_aug1.0_714.1_07637 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_815.1_17857.t1 | 2 | 1 | Mab-21 | 57 | 311 | 8.5e-18 | 64.4 | 6.7e-15 | 5.0e-11 | 42.2 |
| pfu_aug2.0_815.1_17857.t1 | 2 | 2 | Mab-21 | 338 | 395 | 8.5e-18 | 64.4 | 4.1e-08 | 0.00031 | 19.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_815.1_17857.t1 | gi|156400222|ref|XP_001638899.1| | predicted protein [Nematostella vectensis] | 3.0e-12 |
| pfu_aug2.0_815.1_17857.t1 | gi|260811247|ref|XP_002600334.1| | hypothetical protein BRAFLDRAFT_66567 [Branchiostoma floridae] | 2.0e-09 |
| pfu_aug2.0_815.1_17857.t1 | gi|156372963|ref|XP_001629304.1| | predicted protein [Nematostella vectensis] | 1.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_815.1_17857.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_815.1_17857.t1 atggataaactctcccaatctttgacggaccttgacaaacgaatccaaatttctacagctggggaagttcggagaataca acatagcttggaaacaactctcagaaaaaccttagatgttgtgaagaaaaaggaccaaagactgcaagggaaattacttc ctgtgggaagttattattcagatctcaaaatcgggtttccagatgaatttgactacctatatgaactcgaatccattcag gaaaaactcaacttcgaagtgcaaccttctgggttcagtgggagcaagaatctatggagaacaccaaaaggtgatccagg caaaaagaaaattttgctgaaaacgccagaaacgtataaatgtacccaagattctgacgattctgtaaagtggttacatt gcattaatgggaaaagacgtaaagatatagggaatgagtatgttctcgatccagtaggggtcaaaaacactttttacttt gcagttttggaggtcataagaggcatggatccatcacagcttccaagatacttgtctatagacagaacacaagaagccac cttcttgtatggtccggctgtaacactattcttcacgtggaatgggagattttacaagaacttaaaaattacagtagatt tgactgtctgtataaaaacagctgaatgggtggagaaatctggtctacttatgtctgaacatttaaatcctgaaagtagt ttgagtggcatacttcaagtggagattccacgatgtggatttcacctggttccacatatatctgagaggggtcatgtaca gtggaaaatatccacctccttcctcgaaacaaaaatatttgcaagatttcacaaggatgcatctttgaaacaaatcatta gaatcgtcaaatctgtgaaagatctcaacctgaagcatcgaccagatttgaccctactgaatgatccatcactttcttat tttgtgcggtttcacaatttctatgccgggaaggattatgatgagaacttcaaacatatggtttcgtctttcttgataaa aaatgttgtcatgaacatgtgtggatcggcttcttctccagaatggaaaaatgcaaccatctccacactctatctcctta cattgacattcctctacaaaaccttagcatatggaactttacagaattttttcttaccacagcaaaaactaaatattcca gaatttggtgatattttacctggatttcacaagattttcgctgaaattgagagcatgatgccctctgaaaatgccagaaa ttgtgctgaacttggggatctctacaacaaaccattttgtatcggaagtgcagttgctatatttggaaccacaaaggaac acatagactttcattttggtgaatgttggcagccatcttga |
|
Protein
| Protein ID | pfu_aug2.0_815.1_17857.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_815.1_17857.t1 MDKLSQSLTDLDKRIQISTAGEVRRIQHSLETTLRKTLDVVKKKDQRLQGKLLPVGSYYSDLKIGFPDEFDYLYELESIQ EKLNFEVQPSGFSGSKNLWRTPKGDPGKKKILLKTPETYKCTQDSDDSVKWLHCINGKRRKDIGNEYVLDPVGVKNTFYF AVLEVIRGMDPSQLPRYLSIDRTQEATFLYGPAVTLFFTWNGRFYKNLKITVDLTVCIKTAEWVEKSGLLMSEHLNPESS LSGILQVEIPRCGFHLVPHISERGHVQWKISTSFLETKIFARFHKDASLKQIIRIVKSVKDLNLKHRPDLTLLNDPSLSY FVRFHNFYAGKDYDENFKHMVSSFLIKNVVMNMCGSASSPEWKNATISTLYLLTLTFLYKTLAYGTLQNFFLPQQKLNIP EFGDILPGFHKIFAEIESMMPSENARNCAELGDLYNKPFCIGSAVAIFGTTKEHIDFHFGECWQPS |
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