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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_815.1_17859
Locus scaffold815.1 : 194839 ... 200821 : +
To GenomeBrowser scaffold815.1:194839..200821
Genes list of scaffold scaffold815.1
Synonym pfu_aug1.0_2598.1_01164

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_815.1_17859.t1 gi|291240541|ref|XP_002740178.1| PREDICTED: BRISC and BRCA1-A complex member 1-like [Saccoglossus kowalevskii] 1.96182e-44
pfu_aug2.0_815.1_17859.t1 gi|524880513|ref|XP_005096919.1| PREDICTED: BRISC and BRCA1-A complex member 1-like [Aplysia californica] 8.0e-37
pfu_aug2.0_815.1_17859.t1 gi|156370086|ref|XP_001628303.1| predicted protein [Nematostella vectensis] 2.0e-36
pfu_aug2.0_815.1_17859.t1 gi|72065305|ref|XP_793273.1| PREDICTED: BRISC and BRCA1-A complex member 1 [Strongylocentrotus purpuratus] 6.0e-34
pfu_aug2.0_815.1_17859.t1 gi|676464343|ref|XP_009056892.1| hypothetical protein LOTGIDRAFT_162631 [Lottia gigantea] 4.0e-33

Transcript
Transcript IDpfu_aug2.0_815.1_17859.t1
Definition-
>pfu_aug2.0_815.1_17859.t1
atgcagaacctaattgattttaaaatcaagtcaaaaatcaagatcacagaaactctttttaaggaattcacaaacaacat
aagagagatcattaatttgttggatgatgtgaaaccttcatttgactgtgagactttggacttgtcttcagtgtttgata
ctgtgtacaatagcgtagatcttccatcagtagagggtgatgtatctatcctcccaccaccatatgttgtcagaacatta
ctcatcttaggacgatcgcaatgtcaagttgaatttctagataaaaggagattcaagattttggaaagttctccatacta
cttctctgatgttttatatatccatgaaccaccagatgaaacaaataaatgtgaaagattcaagattttggaaagttctc
catactacttctctgatgttttatatatccatgaaccaccagatgaaacaaataaatgtgaagagacatttgacaaattg
tgtgaagtggatgagaaaggcatgtcttacgtcttagaagtgtccagaaatcctaccagactttacgatttgatggccca
gcttctggcacatcccttacagcgcccctcgcaaaacgatgcggcttataggttactcaatatggcagatatagcggagt
caccacccacttga

Protein
Protein IDpfu_aug2.0_815.1_17859.t1
Definition-
>pfu_aug2.0_815.1_17859.t1
MQNLIDFKIKSKIKITETLFKEFTNNIREIINLLDDVKPSFDCETLDLSSVFDTVYNSVDLPSVEGDVSILPPPYVVRTL
LILGRSQCQVEFLDKRRFKILESSPYYFSDVLYIHEPPDETNKCERFKILESSPYYFSDVLYIHEPPDETNKCEETFDKL
CEVDEKGMSYVLEVSRNPTRLYDLMAQLLAHPLQRPSQNDAAYRLLNMADIAESPPT

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