Gene
| Gene Model ID | pfu_aug2.0_815.1_17860 |
|---|---|
| Locus | scaffold815.1 : 201201 ... 209798 : - |
| To GenomeBrowser | scaffold815.1:201201..209798 |
| Genes list of scaffold | scaffold815.1 |
| Synonym | pfu_aug1.0_17434.1_47098 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_815.1_17860.t1 | 1 | 1 | Vps55 | 4 | 119 | 4.4e-39 | 132.9 | 3.40516e-43 | 5.1e-39 | 132.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_815.1_17860.t1 | gi|676464362|ref|XP_009056898.1| | hypothetical protein LOTGIDRAFT_120896, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_815.1_17860.t1 | gi|524909816|ref|XP_005109805.1| | PREDICTED: leptin receptor overlapping transcript-like 1-like, partial [Aplysia californica] | 0.0 |
| pfu_aug2.0_815.1_17860.t1 | gi|657817545|ref|XP_008335793.1| | PREDICTED: leptin receptor gene-related protein [Cynoglossus semilaevis] | 1.96182e-44 |
| pfu_aug2.0_815.1_17860.t1 | gi|736174869|ref|XP_010766931.1| | PREDICTED: leptin receptor gene-related protein [Notothenia coriiceps] | 1.96182e-44 |
| pfu_aug2.0_815.1_17860.t1 | gi|734623602|ref|XP_010739806.1| | PREDICTED: leptin receptor gene-related protein [Larimichthys crocea] | 4.06377e-44 |
Transcript
| Transcript ID | pfu_aug2.0_815.1_17860.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_815.1_17860.t1 atgtcaaagttgatagcgttagcttttgctgcagcagcaggcatcacatttctggttttaggatgtgcccttttccagaa ctggtggcctatgtttgtgctgttcttctacgtactgtctcccatacctacggttatttcacggaggatggccggaagtt ttgatacagcgagcagtgcgtgtatggaactgtgtatatttctcactgtggggatcgttatttcctctgtgggtcttcca gttatactggcacatgccacaattattcaatggggagcatgtggtttggttctcacaggaaacttagtggtatttttgac aatccttggatatttctatgtatttggagaggatgatctggattattccagctgtttaagtttgaatattttagtcttct catga |
|
Protein
| Protein ID | pfu_aug2.0_815.1_17860.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_815.1_17860.t1 MSKLIALAFAAAAGITFLVLGCALFQNWWPMFVLFFYVLSPIPTVISRRMAGSFDTASSACMELCIFLTVGIVISSVGLP VILAHATIIQWGACGLVLTGNLVVFLTILGYFYVFGEDDLDYSSCLSLNILVFS |
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