Gene
| Gene Model ID | pfu_aug2.0_815.1_17861 |
|---|---|
| Locus | scaffold815.1 : 215819 ... 227552 : + |
| To GenomeBrowser | scaffold815.1:215819..227552 |
| Genes list of scaffold | scaffold815.1 |
| Synonym | pfu_aug1.0_3016.1_16004 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transitional endoplasmic reticulum partial | GO:0000502 GO:0000836 GO:0005524 GO:0005634 GO:0005811 GO:0005829 GO:0006302 GO:0006919 GO:0016787 GO:0018279 GO:0019903 GO:0019904 GO:0019985 GO:0030970 GO:0031334 GO:0031593 GO:0032436 GO:0035800 GO:0035861 GO:0044822 GO:0048471 GO:0070062 GO:0070842 GO:1903007 GO:1990381 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | CDC48_N | 20 | 95 | 4.5e-21 | 74.5 | 2.2e-22 | 6.0e-20 | 70.9 |
| pfu_aug2.0_815.1_17861.t1 | 1 | 1 | CDC48_2 | 98 | 158 | 4.5e-11 | 42.2 | 4.5e-13 | 1.3e-10 | 40.7 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | CDC48_N | 113 | 139 | 4.5e-21 | 74.5 | 2.2 | 610.0 | 0.4 |
| pfu_aug2.0_815.1_17861.t1 | 3 | 1 | AAA_16 | 204 | 231 | 3.0e-12 | 46.9 | 3.1e-06 | 0.00086 | 19.3 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | Zeta_toxin | 205 | 246 | 2.0e-08 | 33.5 | 4.9e-05 | 0.014 | 14.5 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | Arch_ATPase | 205 | 250 | 1.6e-06 | 27.9 | 0.0012 | 0.33 | 10.6 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | AAA_19 | 206 | 227 | 8.7e-08 | 31.8 | 1.7e-05 | 0.0049 | 16.5 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | TIP49 | 207 | 251 | 5.0e-09 | 35.3 | 2.1e-06 | 0.00058 | 18.6 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | IstB_IS21 | 207 | 229 | 1.4e-08 | 34.3 | 3.6e-05 | 0.01 | 15.2 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | AAA_22 | 208 | 275 | 5.7e-12 | 45.9 | 3.6e-06 | 0.001 | 19.2 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | AAA | 209 | 281 | 0.0 | 258.8 | 8.6e-30 | 2.4e-27 | 95.7 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | RuvB_N | 209 | 281 | 1.7e-13 | 50.1 | 1.3e-07 | 3.6e-05 | 22.9 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | AAA_17 | 209 | 280 | 4.9e-13 | 49.9 | 2.5e-07 | 7.1e-05 | 23.6 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | AAA_33 | 209 | 255 | 4.8e-11 | 42.7 | 5.5e-07 | 0.00015 | 21.6 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | AAA_5 | 209 | 278 | 2.4e-10 | 40.2 | 8.1e-07 | 0.00023 | 20.9 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | AAA_14 | 209 | 277 | 6.3e-09 | 35.8 | 3.1e-05 | 0.0086 | 15.9 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | AAA_2 | 209 | 282 | 9.4e-09 | 35.4 | 1.4e-05 | 0.0038 | 17.1 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | AAA_18 | 209 | 240 | 4.7e-08 | 33.3 | 3.6e-05 | 0.01 | 16.1 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | RNA_helicase | 209 | 233 | 6.0e-08 | 32.8 | 0.00057 | 0.16 | 12.1 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | Mg_chelatase | 209 | 226 | 1.2e-07 | 31.1 | 0.00013 | 0.037 | 13.1 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | AAA_28 | 209 | 259 | 7.7e-07 | 29.2 | 0.00015 | 0.041 | 13.8 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | Parvo_NS1 | 209 | 232 | 1.1e-06 | 27.7 | 0.00034 | 0.095 | 11.5 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 1 | Sigma54_activ_2 | 209 | 281 | 1.6e-06 | 28.2 | 0.0002 | 0.057 | 13.4 |
| pfu_aug2.0_815.1_17861.t1 | 4 | 1 | AAA_25 | 209 | 224 | 1.6e-06 | 27.6 | 0.0057 | 1.6 | 8.1 |
| pfu_aug2.0_815.1_17861.t1 | 4 | 2 | AAA_25 | 254 | 281 | 1.6e-06 | 27.6 | 1.2 | 320.0 | 0.5 |
| pfu_aug2.0_815.1_17861.t1 | 3 | 2 | AAA_16 | 259 | 281 | 3.0e-12 | 46.9 | 0.86 | 240.0 | 1.5 |
| pfu_aug2.0_815.1_17861.t1 | 4 | 3 | AAA_25 | 321 | 362 | 1.6e-06 | 27.6 | 8.0e-05 | 0.022 | 14.1 |
| pfu_aug2.0_815.1_17861.t1 | 3 | 3 | AAA_16 | 341 | 395 | 3.0e-12 | 46.9 | 1.4e-06 | 0.00039 | 20.4 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | TIP49 | 341 | 386 | 5.0e-09 | 35.3 | 4.2e-05 | 0.012 | 14.3 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | IstB_IS21 | 341 | 365 | 1.4e-08 | 34.3 | 2.2e-05 | 0.0061 | 15.9 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | Mg_chelatase | 341 | 362 | 1.2e-07 | 31.1 | 3.3e-05 | 0.0092 | 15.1 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | RuvB_N | 343 | 377 | 1.7e-13 | 50.1 | 3.8e-08 | 1.1e-05 | 24.6 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | AAA_5 | 343 | 374 | 2.4e-10 | 40.2 | 5.9e-05 | 0.016 | 14.8 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | Sigma54_activ_2 | 343 | 414 | 1.6e-06 | 28.2 | 0.00061 | 0.17 | 11.9 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | AAA | 344 | 477 | 0.0 | 258.8 | 0.0 | 0.0 | 161.0 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | AAA_17 | 344 | 489 | 4.9e-13 | 49.9 | 5.3e-07 | 0.00015 | 22.5 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | AAA_22 | 344 | 373 | 5.7e-12 | 45.9 | 5.5e-06 | 0.0015 | 18.6 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | AAA_33 | 344 | 388 | 4.8e-11 | 42.7 | 4.4e-06 | 0.0012 | 18.6 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | AAA_14 | 344 | 413 | 6.3e-09 | 35.8 | 1.2e-05 | 0.0032 | 17.3 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | AAA_2 | 344 | 440 | 9.4e-09 | 35.4 | 4.5e-05 | 0.013 | 15.4 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | Zeta_toxin | 344 | 377 | 2.0e-08 | 33.5 | 1.2e-05 | 0.0032 | 16.5 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | AAA_18 | 344 | 393 | 4.7e-08 | 33.3 | 0.0001 | 0.028 | 14.7 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | RNA_helicase | 344 | 373 | 6.0e-08 | 32.8 | 1.0e-05 | 0.0029 | 17.7 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | AAA_28 | 344 | 382 | 7.7e-07 | 29.2 | 0.00024 | 0.068 | 13.1 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | Parvo_NS1 | 344 | 365 | 1.1e-06 | 27.7 | 6.4e-05 | 0.018 | 13.9 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | Arch_ATPase | 344 | 366 | 1.6e-06 | 27.9 | 0.00064 | 0.18 | 11.4 |
| pfu_aug2.0_815.1_17861.t1 | 2 | 2 | AAA_19 | 347 | 364 | 8.7e-08 | 31.8 | 0.0002 | 0.057 | 13.1 |
| pfu_aug2.0_815.1_17861.t1 | 4 | 4 | AAA_25 | 391 | 434 | 1.6e-06 | 27.6 | 1.4 | 400.0 | 0.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_815.1_17861.t1 | gi|699688057|ref|XP_009904388.1| | PREDICTED: transitional endoplasmic reticulum ATPase-like, partial [Picoides pubescens] | 0.0 |
| pfu_aug2.0_815.1_17861.t1 | gi|733924622|ref|XP_010723540.1| | PREDICTED: transitional endoplasmic reticulum ATPase-like [Meleagris gallopavo] | 0.0 |
| pfu_aug2.0_815.1_17861.t1 | gi|676464366|ref|XP_009056899.1| | hypothetical protein LOTGIDRAFT_216777 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_815.1_17861.t1 | gi|736185994|ref|XP_010770092.1| | PREDICTED: transitional endoplasmic reticulum ATPase-like [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_815.1_17861.t1 | gi|704243457|ref|XP_010145562.1| | PREDICTED: transitional endoplasmic reticulum ATPase, partial [Eurypyga helias] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_815.1_17861.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_815.1_17861.t1 atgacagacagtgatgacttggcaacagccattttgcggaaaaaggatcgtcccaacagactgttggtggaagaggcaat caatgaagacaattctgttgtatctctttctcaggcaaaaatggatgagctgcagttatttagaggtgacacagtattgc tgaagggaaaacgcagaagagataccgtttgtatagtactgtcagatgacactgtaaccgacgacaaaatcagaattaac agatgtgtcaggaataatttacgtgtcagacttggagatgtcgtaagaaacatatttgaggtatatctgaagccatattt cctggaagcatacagaccgatccgtaaaggtgacatattcttggtgagaggaggaatgcgggcggtagaattcaaagtca tagagacagaccccagtccatactgtattgtcgcccctgacacagtaatacattgtgaaggagaacctgtcaaacgagag gaggaggaggaagctctaaatgaagtagggtatgatgatataggaggctgtagaaaacagctggcacagatcaaagaaat ggtagaactccctctcagacatccacaactcttcaaagccattggtgtcaagccaccaagaggaatacttctgtatggtc ccccaggaactggtaaaactctgatagccagagctgttgcaaatgaaacaggagctttcttctttctcattaatggtcct gaaattatgagtaagctggcaggagagtcagaaagtaatctcagaaaagcttttgaggaggcggagaaaaattcacctgc aattatcttcattgacgaattggatgctattgctccaaagagagaaaagtgggctcttggtaaaagtaatcctagtgctc tcagagaaacctgtgtggaggtacccacagtcacatgggaagacattggaggtttggaaaacgtcaaaaaagaactgcaa gaattggtgcaatatccagtggaacatccagagaagttcctaaaattcggaatgactccatcaaaaggagtgttgtttta tggtcccccaggatgtggtaaaactctgctggccaaagccattgctaacgagtgtcaggctaacttcatctcaatcaaag gtccagaacttttgaccatgtggtttggagaatcagaagctaatgtcagggacatttttgataaagcaagatctgctgcg ccatgtgtcttgttctttgatgagttagactccattgccaaggccagaggtggaaatgtgggagacggtggtggtgctgc tgacagagttataaaccagcttctgacagaaatggacggaatgagtgccaagaaaaatgtatttatcattggagccacaa atagacctgatatcatagatccagccattttacgtccaggccgtcttgatcaactgatctacattcctttaccagatgaa aagtcacgcatgtccatcgtgaaggctaatctcagaaagtcacctgtatcagatggagtcgatagaagcggaaatcagga tggagaaggaaagggcaaaaaatccagatggggatatggagtacgatga |
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Protein
| Protein ID | pfu_aug2.0_815.1_17861.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_815.1_17861.t1 MTDSDDLATAILRKKDRPNRLLVEEAINEDNSVVSLSQAKMDELQLFRGDTVLLKGKRRRDTVCIVLSDDTVTDDKIRIN RCVRNNLRVRLGDVVRNIFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVIETDPSPYCIVAPDTVIHCEGEPVKRE EEEEALNEVGYDDIGGCRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGP EIMSKLAGESESNLRKAFEEAEKNSPAIIFIDELDAIAPKREKWALGKSNPSALRETCVEVPTVTWEDIGGLENVKKELQ ELVQYPVEHPEKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDIFDKARSAA PCVLFFDELDSIAKARGGNVGDGGGAADRVINQLLTEMDGMSAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE KSRMSIVKANLRKSPVSDGVDRSGNQDGEGKGKKSRWGYGVR |
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