Gene
| Gene Model ID | pfu_aug2.0_816.1_21177 |
|---|---|
| Locus | scaffold816.1 : 19846 ... 36821 : + |
| To GenomeBrowser | scaffold816.1:19846..36821 |
| Genes list of scaffold | scaffold816.1 |
| Synonym | pfu_aug1.0_8951.1_02675 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| unconventional myosin-xv isoform x2 | GO:0003774 GO:0005524 GO:0008152 GO:0016459 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_816.1_21177.t1 | 2 | 1 | Myosin_head | 14 | 78 | 0.0 | 451.6 | 5.1e-18 | 7.6e-15 | 54.0 |
| pfu_aug2.0_816.1_21177.t1 | 2 | 2 | Myosin_head | 80 | 441 | 0.0 | 451.6 | 0.0 | 0.0 | 399.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_816.1_21177.t1 | gi|676480526|ref|XP_009062088.1| | hypothetical protein LOTGIDRAFT_154633 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_816.1_21177.t1 | gi|242017795|ref|XP_002429372.1| | myosin XV, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_816.1_21177.t1 | gi|641666074|ref|XP_008183602.1| | PREDICTED: unconventional myosin-XV isoform X2 [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_816.1_21177.t1 | gi|328712705|ref|XP_003244885.1| | PREDICTED: unconventional myosin-XV isoform X1 [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_816.1_21177.t1 | gi|524902161|ref|XP_005107413.1| | PREDICTED: unconventional myosin-XV-like [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_816.1_21177.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_816.1_21177.t1 atggaggatcgggacagggaggggcaagatcaagggttagaggacctgatcaacctcagcatcctagacgaaacagtgat ccttaaaaacctcagtcacagatatgaaagggaacttatctatacatttgtggggagcatattggtgtctgtcaatccct accagatgtttaacatatatggactggatatggtcaagaagtatgagggacaggcgctgggtaacatgcctcccatccta gacgaaacagtgatcctaaaaaacctcagtcatagatatgaaagggaacttatctatacatttgtggggagcatattggt gtctgtcaatccctaccagatgtttaacatatatggactggatatggtcaagaagtatgagggacaggcgctgggtaaca tgcctccacatctttttgctgttgggagtgcctcttacagcaagatgatgaaggacacagagaaccaagttcttgtcatt agtggcgagtcaggggcggggaagacggaggcgacgaagttgatcatgcagtacctggcagcggtcaataaatctggtaa taacctaatcacagagcaaatcctagaagccaaccccctactggaatcattcggcaatgccaaaactatcaggaacgaca actccagcagattcgggaaatttattgaagttttctttaaaaatgcagaaataaaagagatagaggttgtacgtgttaat gaaattaccgtgaaggctcaggatgagagaaactaccatgtgttctatgagatgttgtctgggatgtcggaggaaactcg gggaaagtttggacttcagactccctccaagtatttttaccttaatcagggtggaaactgtacgatacagggaagggacg acaaagataacttcaggtctctgtcggcagccatggatgtgcttaactttgaaaggacggaacaggaaacgatattcaag atgctggcatctgtgttacacattggaaatatttatttcaaaaagattcaggacagcacaaatcatgacacagtattact gggcagtgacgcagaaatcaaatggatctcccatctcttacaactatctgaagactggctcaaacaggcactcaccacca aagtcacggacactcgaggagatagagttttatcaccgtataacattgatcaagccctagatgcaagggatgccatagcc aaggctttatatagcagacttttcacatggctggtagaacgagttaatcttatcatatgtagagcagagagagacaaaaa tacatcactagccgtactggacatttttggttttgaggtttgtagtttatttgcattttga |
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Protein
| Protein ID | pfu_aug2.0_816.1_21177.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_816.1_21177.t1 MEDRDREGQDQGLEDLINLSILDETVILKNLSHRYERELIYTFVGSILVSVNPYQMFNIYGLDMVKKYEGQALGNMPPIL DETVILKNLSHRYERELIYTFVGSILVSVNPYQMFNIYGLDMVKKYEGQALGNMPPHLFAVGSASYSKMMKDTENQVLVI SGESGAGKTEATKLIMQYLAAVNKSGNNLITEQILEANPLLESFGNAKTIRNDNSSRFGKFIEVFFKNAEIKEIEVVRVN EITVKAQDERNYHVFYEMLSGMSEETRGKFGLQTPSKYFYLNQGGNCTIQGRDDKDNFRSLSAAMDVLNFERTEQETIFK MLASVLHIGNIYFKKIQDSTNHDTVLLGSDAEIKWISHLLQLSEDWLKQALTTKVTDTRGDRVLSPYNIDQALDARDAIA KALYSRLFTWLVERVNLIICRAERDKNTSLAVLDIFGFEVCSLFAF |
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