Gene
| Gene Model ID | pfu_aug2.0_816.1_21180 |
|---|---|
| Locus | scaffold816.1 : 92876 ... 100692 : + |
| To GenomeBrowser | scaffold816.1:92876..100692 |
| Genes list of scaffold | scaffold816.1 |
| Synonym | pfu_aug1.0_13552.1_53965 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ankyrin repeat domain-containing protein partial | GO:0044464 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_816.1_21180.t1 | 2 | 1 | Ank_2 | 47 | 126 | 6.1e-31 | 106.6 | 5.2e-24 | 1.6e-20 | 73.2 |
| pfu_aug2.0_816.1_21180.t1 | 4 | 1 | Ank | 49 | 61 | 3.0e-21 | 74.0 | 0.38 | 1100.0 | -0.4 |
| pfu_aug2.0_816.1_21180.t1 | 4 | 1 | Ank_3 | 49 | 57 | 2.5e-13 | 48.8 | 1.5 | 4500.0 | -1.5 |
| pfu_aug2.0_816.1_21180.t1 | 2 | 1 | Ank_5 | 50 | 100 | 3.1e-20 | 71.7 | 2.6e-13 | 7.7e-10 | 38.6 |
| pfu_aug2.0_816.1_21180.t1 | 3 | 1 | Ank_4 | 50 | 84 | 3.8e-20 | 71.8 | 9.0e-08 | 0.00027 | 21.3 |
| pfu_aug2.0_816.1_21180.t1 | 4 | 2 | Ank | 65 | 94 | 3.0e-21 | 74.0 | 2.2e-11 | 6.4e-08 | 32.0 |
| pfu_aug2.0_816.1_21180.t1 | 3 | 2 | Ank_4 | 65 | 117 | 3.8e-20 | 71.8 | 4.6e-15 | 1.4e-11 | 44.5 |
| pfu_aug2.0_816.1_21180.t1 | 4 | 2 | Ank_3 | 65 | 91 | 2.5e-13 | 48.8 | 1.6e-08 | 4.8e-05 | 23.1 |
| pfu_aug2.0_816.1_21180.t1 | 2 | 2 | Ank_5 | 83 | 137 | 3.1e-20 | 71.7 | 3.6e-13 | 1.1e-09 | 38.2 |
| pfu_aug2.0_816.1_21180.t1 | 2 | 2 | Ank_2 | 97 | 137 | 6.1e-31 | 106.6 | 3.2e-13 | 9.4e-10 | 38.7 |
| pfu_aug2.0_816.1_21180.t1 | 4 | 3 | Ank | 97 | 127 | 3.0e-21 | 74.0 | 1.9e-12 | 5.6e-09 | 35.3 |
| pfu_aug2.0_816.1_21180.t1 | 4 | 3 | Ank_3 | 97 | 123 | 2.5e-13 | 48.8 | 1.6e-07 | 0.00048 | 20.1 |
| pfu_aug2.0_816.1_21180.t1 | 3 | 3 | Ank_4 | 108 | 137 | 3.8e-20 | 71.8 | 4.6e-06 | 0.014 | 15.9 |
| pfu_aug2.0_816.1_21180.t1 | 4 | 4 | Ank | 130 | 137 | 3.0e-21 | 74.0 | 0.13 | 390.0 | 1.1 |
| pfu_aug2.0_816.1_21180.t1 | 4 | 4 | Ank_3 | 130 | 137 | 2.5e-13 | 48.8 | 0.43 | 1300.0 | 0.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_816.1_21180.t1 | gi|530626312|ref|XP_005302691.1| | PREDICTED: ankyrin repeat domain-containing protein 54 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_816.1_21180.t1 | gi|558143551|ref|XP_006119037.1| | PREDICTED: ankyrin repeat domain-containing protein 54, partial [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_816.1_21180.t1 | gi|541993018|ref|XP_005446834.1| | PREDICTED: ankyrin repeat domain-containing protein 54, partial [Falco cherrug] | 0.0 |
| pfu_aug2.0_816.1_21180.t1 | gi|699595894|ref|XP_009868159.1| | PREDICTED: ankyrin repeat domain-containing protein 54, partial [Apaloderma vittatum] | 0.0 |
| pfu_aug2.0_816.1_21180.t1 | gi|529426213|ref|XP_005232941.1| | PREDICTED: ankyrin repeat domain-containing protein 54, partial [Falco peregrinus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_816.1_21180.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_816.1_21180.t1 atgaaggagttcaaatcggggcagacaactgggcggaatatagcagatgagaagagacttagaaatgctgccaacaacaa tgaattaaattatgccagtgatgcccataaatttctaagtcacaaggtcaaagttcaagtgatacagttacttgacactg gcgtggatgtttgttgttatgacgacaagaaaaggtcacctctacattttgcagcatcacagggatatgagacaatagtg aaagttttgttggacaaaggagcgaatcccaatcaaaaagatatgttagggaatacagctctacatttagcggcatgcac tggacatgttcccgttgtgacactcctactgagggcaggaacggacatttgctcagtagatcgtagtggccggactcctc tctcagtagccaaatccaggctgagatttcttgtggaggaaaaatcttacacctcagaaagggtgaaaaatgaggcactc caggttagtgagatgatgaagacatacctacgcctgtctggtatgaacgatgacgcagaccagctggacatactttgtga ccagttacgtaaagtatccactcgagtagaaatggacaatgttaatacactgatggcagatctcgccagtttgtcgttag aaaagaagagtaagccaccttga |
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Protein
| Protein ID | pfu_aug2.0_816.1_21180.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_816.1_21180.t1 MKEFKSGQTTGRNIADEKRLRNAANNNELNYASDAHKFLSHKVKVQVIQLLDTGVDVCCYDDKKRSPLHFAASQGYETIV KVLLDKGANPNQKDMLGNTALHLAACTGHVPVVTLLLRAGTDICSVDRSGRTPLSVAKSRLRFLVEEKSYTSERVKNEAL QVSEMMKTYLRLSGMNDDADQLDILCDQLRKVSTRVEMDNVNTLMADLASLSLEKKSKPP |
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