Gene
| Gene Model ID | pfu_aug2.0_816.1_21182 |
|---|---|
| Locus | scaffold816.1 : 106131 ... 124895 : - |
| To GenomeBrowser | scaffold816.1:106131..124895 |
| Genes list of scaffold | scaffold816.1 |
| Synonym | pfu_aug1.0_14838.1_25348 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_816.1_21182.t1 | 4 | 1 | Methyltransf_12 | 394 | 463 | 3.9e-10 | 40.0 | 7.8e-05 | 0.29 | 11.6 |
| pfu_aug2.0_816.1_21182.t1 | 4 | 1 | Methyltransf_11 | 394 | 466 | 1.4e-06 | 28.7 | 0.0008 | 3.0 | 8.4 |
| pfu_aug2.0_816.1_21182.t1 | 4 | 2 | Methyltransf_12 | 775 | 844 | 3.9e-10 | 40.0 | 7.8e-05 | 0.29 | 11.6 |
| pfu_aug2.0_816.1_21182.t1 | 4 | 2 | Methyltransf_11 | 775 | 847 | 1.4e-06 | 28.7 | 0.0008 | 3.0 | 8.4 |
| pfu_aug2.0_816.1_21182.t1 | 4 | 3 | Methyltransf_11 | 941 | 994 | 1.4e-06 | 28.7 | 0.54 | 2000.0 | -0.7 |
| pfu_aug2.0_816.1_21182.t1 | 4 | 3 | Methyltransf_12 | 946 | 994 | 3.9e-10 | 40.0 | 1.7 | 6100.0 | -2.3 |
| pfu_aug2.0_816.1_21182.t1 | 4 | 4 | Methyltransf_12 | 1036 | 1108 | 3.9e-10 | 40.0 | 0.0001 | 0.38 | 11.2 |
| pfu_aug2.0_816.1_21182.t1 | 4 | 4 | Methyltransf_11 | 1036 | 1119 | 1.4e-06 | 28.7 | 0.0042 | 15.0 | 6.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_816.1_21182.t1 | gi|740788861|ref|WP_038574145.1| | hypothetical protein, partial [Rhizobium leguminosarum] | 6.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_816.1_21182.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_816.1_21182.t1 atggccacgtcaatatggaacgtcaccgtcacaacggtttgtgggaagcggtacgtggtcccagcgttagtatttgcagt atttcttatgtatttgtcatacacgacgtatggacataacagtgttggtgagcgtactgcgtatccatctccacagaaaa cttgtgcaatatccaaagattgtcagtcaaattgtagcgtatgcttacaccaaaggtgtcatgacgtcacagagggagtt aagtgtagcccttcggattacgttcagacaatacaaaattatattcaaagaaaaagtggaaataatatcgtggtttccag tgtgatttgtttacaagatatgacaaaaattaaatgtctagttaaagaaaactcccaaatcaacacgttgataaattcca tgaaacaggatatacgtgacagttatttccgagtctgcagaggagcactgtggatacttaaagaaaactcaccgttagac aacatcaaacgtcaacctaagttacttgacaacaattttaaagtcgactttagggatagtgagttgtcattagatgaagc gggaaatgggaacagattgaatgctatgattgatgtaaattccgataatgacagagggaacccgtcgaatacaaacttcc gtaaccaaggtgctaatattgaggacaatgttaattcttatgaaaatactcacaaaggaaatccaaagacaaattcaaac ctccgtccatttagtgtaaaaggaagcgattcgctgaaaaatgatgaagacgaagacaaagatttaacggaattattgca aaataaagacgtaagaaaccaaaaagcttctgaaccaaactccgatagaaatccataccccgatagaaatccataccccg atagaaatccataccccgatagaaatccaaacactgtcaattccaatacattaaataataagaatcaagcagcgtccatt caaagaactaatccgtcaagttcagacatggttaacacgacaagaccaaagcaaatcgaccaaaacgtacaaaatgtatt tgaggatatagcacagaaaagttcctggggtgggggtgcggaaacacgatcaggaccaggttctctgctggcatccaccg tgtcactacgggaatgtctaggcaggtggatacagaagtacaacatcaggagtattgtggatatcccgtgtggagacgct aactggcagaggtctatacctggaatagaaaatgtcgcatataggggatacgatatatcttctactgcggtatcaagagc taggacgaaaaattctatgaaaaatatgctatttggagttatggatataacgagtcaaattcctcccccggctgacctga ttattttaagagattttgttcagcatttaccgttagctttagggttacatgctcttaataacgctaggcgttcaggagcc aagtggataggtatatcttcctatccggactctaaatcaaacagaaatataaatacgggtgactattatagaaacaatgt acaaatcgcaccatttaatatgcagaatgtgacagaaatgtgtgataattactcaggtgaagaaaacagaggtcatccag ggtcaaaatttttactttttcaaaataaattatcgcaaagtacagtcccaagaaccgaagaagcctcaaaagcaaaccca aaaagaaatccaaatacgggcagttccaatacattaaccaataggaatcaagaagcaccaactttgaaatccaatccttc ggttangtcgaatacaaacttccgtaaccaaggtgctaatattgaggacaatgttaattcttatgaaaatactcacaaag gaaatccaaagacaaattcaaacctccgtccatttagtgtaaaaggaagcgattcgctgaaaaatgatgaagacgaagac aaagatttaacggaattattgcaaaataaagacgtaagaaaccaaaaagcttctgaaccaaactccgatagaaatccata ccccgatagaaatccataccccgatagaaatccataccccgatagaaatccaaacactgtcaattccaatacattaaata ataagaatcaagcagcgtccattcaaagaactaatccgtcaagttcagacatggttaacacgacaagaccaaagcaaatc gaccaaaacgtacaaaatgtatttgaggatatagcacagaaaagttcctggggtgggggtgcggaaacacgatcaggacc aggttctctgctggcatccaccgtgtcactacgggaatgtctaggcaggtggatacagaagtacaacatcaggagtattg tggatatcccgtgtggagacgctaactggcagaggtctatacctggaatagaaaatgtcgcatataggggatacgatata tcttctactgcggtatcaagagctaggacgaaaaattctatgaaaaatatgctatttggagttatggatataacgagtca aattcctcccccggctgacctgattattttaagagattttgttcagcatttaccgttagctttagggttacatgctctta ataacgctaggcgttcaggagccaagtggataggtatatcttcctatccggactctaaatcaaacagaaatataaatacg ggtgactattatagaaacaatgtacaaatcgcaccatttaatatgcagaatgtgacagaaatgtgtgataattactcagg tgaagaaaacagaggtcatccagggtcaaaatttttactttttcaaaataaattatcgcaaagtacagtcccaagaaccg aagaagcctcaaaagcaaacccaaaaagaaatccaaatacgggcagttccaatacattaaccaataggaatcaagaagca ccaactttgaaatccaatccttcggttacagacgtggtaaattctgagggaacaaaacaaataaacgaagatgtacaaaa tgtatttgaggatatagcaaagaaaagttcctggggtgggggttcagagacacgatcgggaccagggtcactgctggcat ccaccgtgtcactacgggaatgtctaggcaggtggatacagaaatataacatcagaagtattgtggatatcccgtgtgga gacgccaactggcagaggtctatacctggaatagaaaatgtcgcgtataggggatacgatatatcttctactgcggtatc tagagctaggagtaaaaattctatgaaaaatatgctatttggaattatggatgtttctagtaaaattccccctaaagccg acttaattattcttagagattttgttcagcatttaccgttagcattagggttgcgtgctctaaacaatgccaggcgttca ggagccaagtggataggaatatcttcctatccggactctcgatcaaacagaaatataaatacgggtgattattatagaaa caatgtacaaatcgcaccatttaatatgcagaatgtgacagaaatgtgtgataattactcaggcgaagagaacagaattc attcaggatcaaaatttttactttttcaaaataaattagcacttactaatacttaa |
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Protein
| Protein ID | pfu_aug2.0_816.1_21182.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_816.1_21182.t1 MATSIWNVTVTTVCGKRYVVPALVFAVFLMYLSYTTYGHNSVGERTAYPSPQKTCAISKDCQSNCSVCLHQRCHDVTEGV KCSPSDYVQTIQNYIQRKSGNNIVVSSVICLQDMTKIKCLVKENSQINTLINSMKQDIRDSYFRVCRGALWILKENSPLD NIKRQPKLLDNNFKVDFRDSELSLDEAGNGNRLNAMIDVNSDNDRGNPSNTNFRNQGANIEDNVNSYENTHKGNPKTNSN LRPFSVKGSDSLKNDEDEDKDLTELLQNKDVRNQKASEPNSDRNPYPDRNPYPDRNPYPDRNPNTVNSNTLNNKNQAASI QRTNPSSSDMVNTTRPKQIDQNVQNVFEDIAQKSSWGGGAETRSGPGSLLASTVSLRECLGRWIQKYNIRSIVDIPCGDA NWQRSIPGIENVAYRGYDISSTAVSRARTKNSMKNMLFGVMDITSQIPPPADLIILRDFVQHLPLALGLHALNNARRSGA KWIGISSYPDSKSNRNINTGDYYRNNVQIAPFNMQNVTEMCDNYSGEENRGHPGSKFLLFQNKLSQSTVPRTEEASKANP KRNPNTGSSNTLTNRNQEAPTLKSNPSVXSNTNFRNQGANIEDNVNSYENTHKGNPKTNSNLRPFSVKGSDSLKNDEDED KDLTELLQNKDVRNQKASEPNSDRNPYPDRNPYPDRNPYPDRNPNTVNSNTLNNKNQAASIQRTNPSSSDMVNTTRPKQI DQNVQNVFEDIAQKSSWGGGAETRSGPGSLLASTVSLRECLGRWIQKYNIRSIVDIPCGDANWQRSIPGIENVAYRGYDI SSTAVSRARTKNSMKNMLFGVMDITSQIPPPADLIILRDFVQHLPLALGLHALNNARRSGAKWIGISSYPDSKSNRNINT GDYYRNNVQIAPFNMQNVTEMCDNYSGEENRGHPGSKFLLFQNKLSQSTVPRTEEASKANPKRNPNTGSSNTLTNRNQEA PTLKSNPSVTDVVNSEGTKQINEDVQNVFEDIAKKSSWGGGSETRSGPGSLLASTVSLRECLGRWIQKYNIRSIVDIPCG DANWQRSIPGIENVAYRGYDISSTAVSRARSKNSMKNMLFGIMDVSSKIPPKADLIILRDFVQHLPLALGLRALNNARRS GAKWIGISSYPDSRSNRNINTGDYYRNNVQIAPFNMQNVTEMCDNYSGEENRIHSGSKFLLFQNKLALTNT |
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