Gene
| Gene Model ID | pfu_aug2.0_8176.1_22863 |
|---|---|
| Locus | scaffold8176.1 : 4623 ... 5535 : - |
| To GenomeBrowser | scaffold8176.1:4623..5535 |
| Genes list of scaffold | scaffold8176.1 |
| Synonym | pfu_aug1.0_24175.1_69619 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_8176.1_22863.t1 | 1 | 1 | HLH | 11 | 58 | 5.0e-12 | 45.3 | 3.0e-15 | 7.4e-12 | 44.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_8176.1_22863.t1 | gi|591313628|ref|XP_007083258.1| | PREDICTED: achaete-scute homolog 3 [Panthera tigris altaica] | 1.0e-09 |
| pfu_aug2.0_8176.1_22863.t1 | gi|410973170|ref|XP_003993028.1| | PREDICTED: achaete-scute homolog 3 [Felis catus] | 1.0e-09 |
| pfu_aug2.0_8176.1_22863.t1 | gi|348553294|ref|XP_003462462.1| | PREDICTED: achaete-scute homolog 3 [Cavia porcellus] | 1.0e-09 |
| pfu_aug2.0_8176.1_22863.t1 | gi|545536731|ref|XP_005633695.1| | PREDICTED: achaete-scute homolog 3 [Canis lupus familiaris] | 2.0e-09 |
| pfu_aug2.0_8176.1_22863.t1 | gi|671040143|ref|XP_008682024.1| | PREDICTED: achaete-scute homolog 3 [Ursus maritimus] | 2.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_8176.1_22863.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8176.1_22863.t1 atgaaaaatgcagtaaaaggaacagacaaaagaaacgcaagggagaggaaaagagtaaaagggatcaatgagatgttgac tattctcaagcaaaaacttccagaagaatggaccagtaggaaaatgagcaagctggaaattctgaggaaatcggcgctgt atattcggcgactaagtcagatgacgcagacggaaacacaaaacgaagatttggcgtcaaccacatgtgcggcagcaaca acatcatcatcgacaccaatagcagcagacacagcctcaggaaaccagacgatccagtcagtgcagacgacatctttgaa agatgcaatggaattaacatttgatgttagtttccctgaaatgcagcatcaaaatgacgaaagctataccggtgtttcag catctgctagtatgacaagtgacagcgaaaagtacacagatgatgactttactttcagccttacagacgacgagttctct atcttggatgattcctttctgcttgatgatgaattgtga |
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Protein
| Protein ID | pfu_aug2.0_8176.1_22863.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8176.1_22863.t1 MKNAVKGTDKRNARERKRVKGINEMLTILKQKLPEEWTSRKMSKLEILRKSALYIRRLSQMTQTETQNEDLASTTCAAAT TSSSTPIAADTASGNQTIQSVQTTSLKDAMELTFDVSFPEMQHQNDESYTGVSASASMTSDSEKYTDDDFTFSLTDDEFS ILDDSFLLDDEL |
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