Gene
| Gene Model ID | pfu_aug2.0_818.1_27813 |
|---|---|
| Locus | scaffold818.1 : 62456 ... 88417 : + |
| To GenomeBrowser | scaffold818.1:62456..88417 |
| Genes list of scaffold | scaffold818.1 |
| Synonym | pfu_aug1.0_9237.1_53307 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_818.1_27813.t1 | 1 | 1 | Sad1_UNC | 304 | 426 | 4.4e-29 | 100.9 | 3.2e-32 | 1.6e-28 | 99.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_818.1_27813.t1 | gi|676472899|ref|XP_009059640.1| | hypothetical protein LOTGIDRAFT_125008, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_818.1_27813.t1 | gi|675746304|ref|XP_008983261.1| | PREDICTED: SUN domain-containing ossification factor isoform X1 [Callithrix jacchus] | 0.0 |
| pfu_aug2.0_818.1_27813.t1 | gi|725561940|ref|XP_010334423.1| | PREDICTED: SUN domain-containing ossification factor isoform X6 [Saimiri boliviensis boliviensis] | 0.0 |
| pfu_aug2.0_818.1_27813.t1 | gi|725561942|ref|XP_010334424.1| | PREDICTED: SUN domain-containing ossification factor isoform X7 [Saimiri boliviensis boliviensis] | 0.0 |
| pfu_aug2.0_818.1_27813.t1 | gi|686701100|ref|XP_009239178.1| | PREDICTED: SUN domain-containing ossification factor isoform X4 [Pongo abelii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_818.1_27813.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_818.1_27813.t1 atgaagaaactatggttgaaatgtctcctactcactgctgtactcacatgtgtgtgtggttctgtggagaccagcacaga gcagactggcagtactaatacagagaatgcagtggacacgggaggcactgataataatattaaagatcttgtaggaggtg atgtagagtcatacaaggaagtgaaggaggatgttattatagatacatctcctcctcatactgacaaggaaacaggaaat caagatgataaagtacctgtcactgactctcagaaactcagtgtcagcaatgcagtaccaagtcaggaggaggcaggcac cactgtggatccgaccccagcttccacagtggatgtagagaaggcatccaccgcagtaactccacagtctacagcatcca ccaatgtggatagcagtgttcaagaaccaatggcagaatccacagtgctggagcatgaagacaaaagtatagctgtagag tcgtcaagtccctcagatacatcaaaaagtgaagatgaaaagggaactaatgtaagggaaactgaagggaaatctgagga gaaagtaaaagaagtaaaagacactcaagatgaaagtgtaaaagttgtacctgtgtctgagccccaacaacctagtggac aatcacagagtacaggacagggggaggtaacccaggcagaccaaataacagaacagcaggatgaaaaagataaagaaacc gaagagtcatcagaaaaagacaaagattttgaaaccttcacagaatggcgccagaaaacactagctgaggagcaggagaa aagcaaaggaactgctgatgagaatagtgcaggaacaaaactatcaatgaagaagcaaaagaagaataattatgccagca aagaatgtggagctaaggttgtagcagccaatcctgagtcggagaatgctaatagggctctaacatcactgaaagatgat tatatgatcaacccctgtaaagccaaaaaatggtttatagttgaattgtgtgagccggtacatgtgaagtcagtagagat ggcaagcttggagttgttttcatcacaaccaaagacgtttaaattaagttttagtgataggtatcctagtaaagaatggc agaattcccagcagtttgagatgacagaggaacgtaaccctcagccgtttgatgtggattttcctgacgatttttacgtt aaatatgttaaagtagaaatgttagaacattatggagaggagcactactgtccacttacactgtttaagttatatggtat accagtagagttagatgattacgactcacaccaggaggaggacagtgatggggatatggatgccgaaattctaaacaatg gggaggatggaagtgaggccaatcaacccaaaacattagtacacagtgttaaagaatctgtaatgaagctggtaaagaaa gttctcaatgttgaggaaaagggagaaggaagtaaaggatccaatgacactgtagtacaacagaatgggacctcagccaa tgacacaagagtaaacagtacatctaaaggtggaatgttaccatgtgtacctgatgctagatttcctgtactgattgaaa tagttatgctttatgattacatttcagaaattctaaataatggggaggatggaagtgaggccaatcaacccaaaacatta gtacacagtgttaaagaatctgtaatgaagctggtaaagaaagttctcaatgttgaggaaaagggagaaggaagtcaagg atccaatgacactgtagtacaacaaaatgggacctcggccaatgatacaactgtaaacagtacatctaaaggtggaatgt taccatgtgtacctgatgctagatatgacagtggtgataaaagtcagacagagaaaacaggtgctgcccccacacatccg tctgttcctaaagccacggctgatcaagttattgagttaccgtgtgttatacctaatgtacaagaggaggatattcagcc acaagtattggatcctgatgtttccatggtaacaaaactggaggaccatgaacaattgccaagtgaacaaatgaagaacc agatggtgaccttgattcaaagtggggactttgagcatataggggaaatttattctgactgtttccatactgcattggca caaaaatcatcaaactctaccagccttaaatgtgtgtacttcagacttatgacaaagaagccctttgtacagttatgccc tgctaagacaggtattgttaaagttgagaaagatcgagatgatttactacagagtattccccagaaaaagttggagaaac cagaagaaaaacagtctactattgttgttattgataacacagcttcgcaaagtcctgaagtgaaagtagaagaaccacct gtgtctctggaggacagtgtagccgagacggaaatcatgtcgacagagtcggtgaaaactacagaggctacttatgttcc aagtgaagcagtgagtcaagtacacatacctgtaactgaagataaaacggaagttaaaaagtctgatgagtcacagaatc agaggcatgaagatataaaacctgctaaaacggtcgaccctgaaatacagtccacattggttgattcaaataccaaagat tctaaacacatgaacaaatctgatgacaaaacaagccagggtgacatactgttagaacctagtcaaactccagtaccctc agaggaaagtagtgtaaccatggaaacaccagtgttgaaggtcacacagactgatgtaccaggtatcagagatcaggaaa gcaaaacatctgcagtaccacaaagtgaggacaaagtgacagtgcagaatgaaccagagactgctaaacaacagttacct gaagtcaaagctgcatccatagttacagtctctagtttatctaacactccaccagtagagggagccaccgtgtcagaaac tcctcttgtggacgcttcaaatctgtctctgattagaggggaggaggaggacaaagtagtaaagcctgcggtagatagta agacatttgataaaccctccccacagcgagacctgggcttggttaggatacctgtggtacctttacagaagagagaaacc gctataatgagactgactaacaggatcaagattctggaaaccaatgtctcactcagtagcagattcctggatcaaatgac tcagaagttcaagaagcaatccaatgaaacattaaagctactgaatgccaagtttgataatctgacacgggaagctgaaa tgagggatcagcgacagcaggaacagattaacgtgttagagagtaaattacagaacctgactagtatggtgtacnctcgg gaagctgaaatgagggatcagcgacagcaggaacagattaacgtgttagagagtaaattacagaacctgactagtatggt gtacacattacaggacaacatgaggctgctcaatcaacaggtgacagacagacagatggtgtggaccactatagaagtgg taatactctgtgttattttcctgttgtgtttgcggcggagtaaatcaacgggacaaatcctacctccagaagtaaagaga ctgttggacaccatgccttcatcattagatgtcactgatggtccggtacctcgacggaattctttttctggggctatgac acaaactcctgcaattaccataggggcaagtctacagaaacacagcagtgatacggcattagcaaacaatcctgaaggac aacaaaagaaagaagccattgaagacagttatattatgaggaaagattcagctaatcatagaaaaaggaagaagaaaaag aaggttcctgaatttaaaccgccatcttcaaccgaagaggaaaatataggaccatgtcacattgaatcgtctagtgctgg gcttctgtttggatcaacggcgagcaaacctgtcacaactaatcagagtttcaatcaattaagccattctaaaagtcatg tgggattctggagcttatttggtgacaaatcggacccgaaacctagatcatcttcaactggtgctacagcaaaccaaaaa gaatccgcaagtcataatatatccaaagaggaactgagccgcaagaaaagtgacgcaccacattgcaaacctaccacagt taaatcattgcataatgatggaaactcgacaaaacacaagaaaaatggttgtccccactttgccaagtctcatcttcaga acagcgtctcaactttgtcatcaaatgtatcgtgtatttcccctacgtttcacaatgtctgtagtgagaattggaagacg agcggctctgaaccccctatacaagcaagcaaaaatatgccagccaaaaagaaaatgacccaccaaagagcatcaagtgc cgacttctcacccaagaaaaatatttccaaaccgtggggaaattttttcggattaaaatga |
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Protein
| Protein ID | pfu_aug2.0_818.1_27813.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_818.1_27813.t1 MKKLWLKCLLLTAVLTCVCGSVETSTEQTGSTNTENAVDTGGTDNNIKDLVGGDVESYKEVKEDVIIDTSPPHTDKETGN QDDKVPVTDSQKLSVSNAVPSQEEAGTTVDPTPASTVDVEKASTAVTPQSTASTNVDSSVQEPMAESTVLEHEDKSIAVE SSSPSDTSKSEDEKGTNVRETEGKSEEKVKEVKDTQDESVKVVPVSEPQQPSGQSQSTGQGEVTQADQITEQQDEKDKET EESSEKDKDFETFTEWRQKTLAEEQEKSKGTADENSAGTKLSMKKQKKNNYASKECGAKVVAANPESENANRALTSLKDD YMINPCKAKKWFIVELCEPVHVKSVEMASLELFSSQPKTFKLSFSDRYPSKEWQNSQQFEMTEERNPQPFDVDFPDDFYV KYVKVEMLEHYGEEHYCPLTLFKLYGIPVELDDYDSHQEEDSDGDMDAEILNNGEDGSEANQPKTLVHSVKESVMKLVKK VLNVEEKGEGSKGSNDTVVQQNGTSANDTRVNSTSKGGMLPCVPDARFPVLIEIVMLYDYISEILNNGEDGSEANQPKTL VHSVKESVMKLVKKVLNVEEKGEGSQGSNDTVVQQNGTSANDTTVNSTSKGGMLPCVPDARYDSGDKSQTEKTGAAPTHP SVPKATADQVIELPCVIPNVQEEDIQPQVLDPDVSMVTKLEDHEQLPSEQMKNQMVTLIQSGDFEHIGEIYSDCFHTALA QKSSNSTSLKCVYFRLMTKKPFVQLCPAKTGIVKVEKDRDDLLQSIPQKKLEKPEEKQSTIVVIDNTASQSPEVKVEEPP VSLEDSVAETEIMSTESVKTTEATYVPSEAVSQVHIPVTEDKTEVKKSDESQNQRHEDIKPAKTVDPEIQSTLVDSNTKD SKHMNKSDDKTSQGDILLEPSQTPVPSEESSVTMETPVLKVTQTDVPGIRDQESKTSAVPQSEDKVTVQNEPETAKQQLP EVKAASIVTVSSLSNTPPVEGATVSETPLVDASNLSLIRGEEEDKVVKPAVDSKTFDKPSPQRDLGLVRIPVVPLQKRET AIMRLTNRIKILETNVSLSSRFLDQMTQKFKKQSNETLKLLNAKFDNLTREAEMRDQRQQEQINVLESKLQNLTSMVYXR EAEMRDQRQQEQINVLESKLQNLTSMVYTLQDNMRLLNQQVTDRQMVWTTIEVVILCVIFLLCLRRSKSTGQILPPEVKR LLDTMPSSLDVTDGPVPRRNSFSGAMTQTPAITIGASLQKHSSDTALANNPEGQQKKEAIEDSYIMRKDSANHRKRKKKK KVPEFKPPSSTEEENIGPCHIESSSAGLLFGSTASKPVTTNQSFNQLSHSKSHVGFWSLFGDKSDPKPRSSSTGATANQK ESASHNISKEELSRKKSDAPHCKPTTVKSLHNDGNSTKHKKNGCPHFAKSHLQNSVSTLSSNVSCISPTFHNVCSENWKT SGSEPPIQASKNMPAKKKMTHQRASSADFSPKKNISKPWGNFFGLK |
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