Gene
| Gene Model ID | pfu_aug2.0_818.1_27815 |
|---|---|
| Locus | scaffold818.1 : 124596 ... 138550 : + |
| To GenomeBrowser | scaffold818.1:124596..138550 |
| Genes list of scaffold | scaffold818.1 |
| Synonym | pfu_aug1.0_12283.1_17843 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_818.1_27815.t1 | 1 | 1 | INTS5_N | 4 | 170 | 3.92364e-44 | 150.6 | 0.0 | 1.09301e-43 | 149.1 |
| pfu_aug2.0_818.1_27815.t1 | 3 | 1 | INTS5_C | 167 | 285 | 0.0 | 378.5 | 5.6e-21 | 4.2e-17 | 61.7 |
| pfu_aug2.0_818.1_27815.t1 | 3 | 2 | INTS5_C | 281 | 550 | 0.0 | 378.5 | 1.5e-39 | 1.1e-35 | 123.0 |
| pfu_aug2.0_818.1_27815.t1 | 3 | 3 | INTS5_C | 553 | 818 | 0.0 | 378.5 | 0.0 | 0.0 | 196.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_818.1_27815.t1 | gi|742211947|ref|XP_010896652.1| | PREDICTED: integrator complex subunit 5 [Esox lucius] | 9.80909e-45 |
| pfu_aug2.0_818.1_27815.t1 | gi|696967391|ref|XP_009554356.1| | PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 5, partial [Cuculus canorus] | 6.99949e-42 |
Transcript
| Transcript ID | pfu_aug2.0_818.1_27815.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_818.1_27815.t1 atgttaaaggacatccttgctgaagtgcgtaactttatagcgggagctagccatgaccgtaaggtatcacacgagagtct gacgtcatcggccctgtgtttactacagacattacctgtggccaggcatgctgtgttagaacatcttgctaacgtgtttg acgaggccgtcaatgtacatattataaaggctcacccacaggccaaaaacattcaaactgatacagacacagagagtttg gacaagacaatcaaggatgcttgtggtgtactgttcagctttataaaaaataatcccattgcttgggcaccaattatttc tacatggaccttggagttattaggacatttgagctgtaagtatgcagggcggccgggcatgcctaatcctaactccctta atgagctcctacagcaatggatgacatgttttcccaccaagtcactcatagaggtcgccactgaatgctttgctgcaatg gttacagatgcccctgaggagagtatgaagtcaaatagtgaggtagtgaaagtaacgacactgccattccttctccagct agcgtccatgtctcagacgctattacaggtcctcacttctgatcttatcaagttctgcactccaaaagttttaaataagt tacatgaacagttcctgaatttcacaattcagaagccagaagattttgaaagtatgatgttattggtaatacacctgttg atgagaattgacaatggagcttttgaggtcatagactttatactgagagtggctaccccagatcttacaaaagatgaggt acctcgtgaagaagttcaggaggttggaggacatatcatcaaccagctactgcgtgactggatactgagatttctgtcgt ttgtcagtttatacagcggtgatgacttgactacggacgtacttctacgtatcatatcagaggcaacctcacctgaacag ttgtcaagtttcctgagacttcaaagtatagtggaagtcaaattaggggacattttgccacgtgctgttcagaaagtgac gaataaactgagatctcacagaattgaaaagccgcttactatcttgaaaaatattctgatgatcatggagtgggagaatg gagagaataatgataaaagcaaagaacggtcttcatttacatactgtataaaatcaggatgggaggcttttattccacta ttgtcacacagtgaccttgagattgtcatgacaacaggcaaaataatgaacatcctgggcatgcccagtaacatatccag tccgtgtgccatacacgtctcctcagctctgctcagcttcttcttctccatcctggatatcaatgatacaaagatgtcga cttccatgtttaaagtttgtagacaatgctttaagaatctcagcaaacagaactacgcacagtttattgttgtaagattt ctactggaaaatgtcgtagataaagatgtgagacatttatttgggggtaaggcaggggacacacccatctcggacaagaa ggacaacacatcactgtttgacgagaaccgacagcacggaatgtccttgaccttaccaaggtcacactccagtgtcttcc atgctggtgttataggtcaaggcctcaggagaaccaccaggaaaattcttctcacacatgatgtgagacatttatttggg ggtaaggcaggggacacacccatctcggacaagaaggacaacacatcactgtttgacgagaaccgacagcacggaatgtc cttgaccttaccaaggtcacactccagtgtcttccatgctggtgttataggtcaaggcctcaggagaaccaccaggaaaa ttcttctcacacatgctcatataaaaagaaacaaagaattccttacagacatgttggctacttgctcacaaaaccacaat gcagcagaggtggagccactttcacctattaaagatgtctctatggaaacagagtctgagtcgcctagcaacagaatgct aagactacaggtgtcaggtgatctgtgtaggatgataggtggcctgctgacagagatgctaacacctgatgtgttataca ataataggttctggccagaggaagagtctatctctatgactgtggaaagagatctgtacgtttttaagcagtttgaagaa aatcctgttctctgggacatcttaaaactctatgctggaaattccctagctatgagcaggtgctctcccattctcaaatc tcttactgcagccttgatgagatactttgagacatctcgagataaatcaaccagagatagtcctaaacaactggaggctg ttacacatctcattcgctgtctctcaaagagttgtctattgccagagcccctgaagtatgtgtcagagttattccccctg acaacgccatttgagacctaccttttattgttaagtgtatggaggtacatgaaggtcagtatgaactga |
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Protein
| Protein ID | pfu_aug2.0_818.1_27815.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_818.1_27815.t1 MLKDILAEVRNFIAGASHDRKVSHESLTSSALCLLQTLPVARHAVLEHLANVFDEAVNVHIIKAHPQAKNIQTDTDTESL DKTIKDACGVLFSFIKNNPIAWAPIISTWTLELLGHLSCKYAGRPGMPNPNSLNELLQQWMTCFPTKSLIEVATECFAAM VTDAPEESMKSNSEVVKVTTLPFLLQLASMSQTLLQVLTSDLIKFCTPKVLNKLHEQFLNFTIQKPEDFESMMLLVIHLL MRIDNGAFEVIDFILRVATPDLTKDEVPREEVQEVGGHIINQLLRDWILRFLSFVSLYSGDDLTTDVLLRIISEATSPEQ LSSFLRLQSIVEVKLGDILPRAVQKVTNKLRSHRIEKPLTILKNILMIMEWENGENNDKSKERSSFTYCIKSGWEAFIPL LSHSDLEIVMTTGKIMNILGMPSNISSPCAIHVSSALLSFFFSILDINDTKMSTSMFKVCRQCFKNLSKQNYAQFIVVRF LLENVVDKDVRHLFGGKAGDTPISDKKDNTSLFDENRQHGMSLTLPRSHSSVFHAGVIGQGLRRTTRKILLTHDVRHLFG GKAGDTPISDKKDNTSLFDENRQHGMSLTLPRSHSSVFHAGVIGQGLRRTTRKILLTHAHIKRNKEFLTDMLATCSQNHN AAEVEPLSPIKDVSMETESESPSNRMLRLQVSGDLCRMIGGLLTEMLTPDVLYNNRFWPEEESISMTVERDLYVFKQFEE NPVLWDILKLYAGNSLAMSRCSPILKSLTAALMRYFETSRDKSTRDSPKQLEAVTHLIRCLSKSCLLPEPLKYVSELFPL TTPFETYLLLLSVWRYMKVSMN |
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