Gene
| Gene Model ID | pfu_aug2.0_82.1_06891 |
|---|---|
| Locus | scaffold82.1 : 96208 ... 118095 : - |
| To GenomeBrowser | scaffold82.1:96208..118095 |
| Genes list of scaffold | scaffold82.1 |
| Synonym | pfu_aug1.0_17.1_14693 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_82.1_06891.t1 | 6 | 1 | LRR_1 | 86 | 98 | 4.5e-07 | 29.0 | 5.0 | 9300.0 | -2.5 |
| pfu_aug2.0_82.1_06891.t1 | 3 | 1 | F-box | 91 | 135 | 7.1e-07 | 28.7 | 3.8e-10 | 7.1e-07 | 28.7 |
| pfu_aug2.0_82.1_06891.t1 | 3 | 1 | F-box-like | 97 | 137 | 2.9e-10 | 39.7 | 1.5e-13 | 2.9e-10 | 39.7 |
| pfu_aug2.0_82.1_06891.t1 | 4 | 1 | LRR_8 | 182 | 220 | 3.5e-09 | 36.2 | 6.0e-05 | 0.11 | 12.2 |
| pfu_aug2.0_82.1_06891.t1 | 6 | 1 | LRR_4 | 182 | 192 | 3.5e-08 | 32.8 | 0.042 | 78.0 | 3.0 |
| pfu_aug2.0_82.1_06891.t1 | 6 | 1 | LRR_6 | 183 | 194 | 4.2e-07 | 29.3 | 0.083 | 150.0 | 2.9 |
| pfu_aug2.0_82.1_06891.t1 | 6 | 2 | LRR_4 | 185 | 222 | 3.5e-08 | 32.8 | 0.00094 | 1.7 | 8.3 |
| pfu_aug2.0_82.1_06891.t1 | 6 | 2 | LRR_1 | 185 | 192 | 4.5e-07 | 29.0 | 0.28 | 520.0 | 1.3 |
| pfu_aug2.0_82.1_06891.t1 | 3 | 2 | F-box-like | 201 | 215 | 2.9e-10 | 39.7 | 2.6 | 4800.0 | -2.7 |
| pfu_aug2.0_82.1_06891.t1 | 6 | 2 | LRR_6 | 208 | 222 | 4.2e-07 | 29.3 | 0.49 | 900.0 | 0.5 |
| pfu_aug2.0_82.1_06891.t1 | 6 | 3 | LRR_1 | 211 | 223 | 4.5e-07 | 29.0 | 0.18 | 340.0 | 1.9 |
| pfu_aug2.0_82.1_06891.t1 | 6 | 3 | LRR_6 | 356 | 374 | 4.2e-07 | 29.3 | 3.8 | 7000.0 | -2.3 |
| pfu_aug2.0_82.1_06891.t1 | 4 | 2 | LRR_8 | 380 | 423 | 3.5e-09 | 36.2 | 9.2e-05 | 0.17 | 11.6 |
| pfu_aug2.0_82.1_06891.t1 | 6 | 3 | LRR_4 | 380 | 416 | 3.5e-08 | 32.8 | 2.2e-05 | 0.041 | 13.5 |
| pfu_aug2.0_82.1_06891.t1 | 6 | 4 | LRR_6 | 380 | 403 | 4.2e-07 | 29.3 | 0.00028 | 0.52 | 10.5 |
| pfu_aug2.0_82.1_06891.t1 | 6 | 4 | LRR_1 | 381 | 395 | 4.5e-07 | 29.0 | 0.0065 | 12.0 | 6.3 |
| pfu_aug2.0_82.1_06891.t1 | 3 | 3 | F-box-like | 397 | 411 | 2.9e-10 | 39.7 | 6.4 | 12000.0 | -3.9 |
| pfu_aug2.0_82.1_06891.t1 | 3 | 2 | F-box | 398 | 411 | 7.1e-07 | 28.7 | 0.62 | 1100.0 | -0.7 |
| pfu_aug2.0_82.1_06891.t1 | 6 | 5 | LRR_6 | 406 | 417 | 4.2e-07 | 29.3 | 0.0027 | 5.0 | 7.5 |
| pfu_aug2.0_82.1_06891.t1 | 4 | 3 | LRR_8 | 407 | 460 | 3.5e-09 | 36.2 | 0.00068 | 1.3 | 8.8 |
| pfu_aug2.0_82.1_06891.t1 | 6 | 4 | LRR_4 | 408 | 443 | 3.5e-08 | 32.8 | 0.00088 | 1.6 | 8.4 |
| pfu_aug2.0_82.1_06891.t1 | 6 | 5 | LRR_1 | 408 | 431 | 4.5e-07 | 29.0 | 0.0051 | 9.5 | 6.7 |
| pfu_aug2.0_82.1_06891.t1 | 6 | 5 | LRR_4 | 435 | 465 | 3.5e-08 | 32.8 | 0.058 | 110.0 | 2.6 |
| pfu_aug2.0_82.1_06891.t1 | 3 | 3 | F-box | 506 | 518 | 7.1e-07 | 28.7 | 0.9 | 1700.0 | -1.2 |
| pfu_aug2.0_82.1_06891.t1 | 6 | 6 | LRR_6 | 513 | 524 | 4.2e-07 | 29.3 | 0.0027 | 5.0 | 7.5 |
| pfu_aug2.0_82.1_06891.t1 | 4 | 4 | LRR_8 | 514 | 567 | 3.5e-09 | 36.2 | 0.00068 | 1.3 | 8.8 |
| pfu_aug2.0_82.1_06891.t1 | 6 | 6 | LRR_4 | 515 | 550 | 3.5e-08 | 32.8 | 0.00076 | 1.4 | 8.6 |
| pfu_aug2.0_82.1_06891.t1 | 6 | 6 | LRR_1 | 515 | 538 | 4.5e-07 | 29.0 | 0.0051 | 9.5 | 6.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_82.1_06891.t1 | gi|676464536|ref|XP_009056953.1| | hypothetical protein LOTGIDRAFT_162707 [Lottia gigantea] | 1.0e-39 |
| pfu_aug2.0_82.1_06891.t1 | gi|752883091|ref|XP_011259232.1| | PREDICTED: S-phase kinase-associated protein 2 [Camponotus floridanus] | 5.0e-35 |
| pfu_aug2.0_82.1_06891.t1 | gi|755984467|ref|XP_011310535.1| | PREDICTED: S-phase kinase-associated protein 2 isoform X3 [Fopius arisanus] | 8.0e-35 |
| pfu_aug2.0_82.1_06891.t1 | gi|755984463|ref|XP_011310534.1| | PREDICTED: S-phase kinase-associated protein 2 isoform X2 [Fopius arisanus] | 1.0e-34 |
| pfu_aug2.0_82.1_06891.t1 | gi|755984459|ref|XP_011310533.1| | PREDICTED: S-phase kinase-associated protein 2 isoform X1 [Fopius arisanus] | 1.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_82.1_06891.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_82.1_06891.t1 atgggttgtgtaaagcttggtatgttggacagtgacagtggtggtgaatcatctcctgattcaggtcagaaacatcttac tccaagttccactgaaccatcaacaagtaggagagctccaggggctccaagggttttattaccaagtcagaaggaaaaca ttctgaacagcagtgccgacaacatagatcctggccaaccagactcttctcccatcctcaggaagcgcggacaggggcat tctcaagttcctgatgatctcaaatgcaatcatttcttggaactgtcagatgaaataatcctcctgattttacgatggtt acccaagtttgtcctcgctaaatgtgccagagtgtgtcacaggtggcatagattagtgaatgatgaatcattatggagaa ggcttgatttggccaataaaacactgtctcagggagctcttggtaacataatcaaaaaaggtgttcaagtcctacgctta gccaaagcagagattgagggccctgtttattcctctgtgccaaaagagattacatttacacctagtctttcaaaactcca gtacctggatctcagtatgtccccggccacagctgatgttctagcggaaataattgccgtgtgtcaagacctcaagaagc tcagcctagagcattgtcacatgtctgaaacttgttgccatcctcccagcgggaggacaaaatctcctgaccaaacaagg atcctcccgatcgaaaatagtcctaccgacgaaaatgaaaatcctccagataatgcaaaatccccagttgtgaattacgt tacgcattatgctggttgtagtgaccagttaataaattttcaaatcaaatcagtagatgctaattatacaggcgacaggt atattgatggacatacaaaagtaattagcgcggcattctctacatcgtcatgggtattcgtctgccccgtgtacgttaag cattttgtagaccatctgatggagcgtataggacaccgttcagtaataattcccgtaaaaggggaaagaagtccaaccaa tcagtttgacaatatacaggacaggttagagggactgaatcttgcatggacagggttgcatcggcacacggtggtatacc tcgctttatgccttacaccaaatctcaaacggctcaacatcagtggatgtagggaaaacatcacagacgaagaggtactc cagctatgtcgaagctgctcaaacctgcgagaattggacctgagtgactctacagtgctaacacatgctgccctgacaca catagaagaaaacttatttgatctggagtatctggcactcagtagatgttataggatacctccacgtgctcttccggatc tgaagaaacttccaaccctctttgcccttgatgtgtttggacttctacaagaggagccattccagacgttaaaagaggca ttgaagccgattaaaataaaccagtttcctttctccagtatcgctagacctaccactggtatacgtagatcaaaggtact ccagctatgtcgaagctgctcaaacctgcgagaattggacctgagtgactctacagtgctaacacatgctgccctgacac acatagaagaaaacttatttgatctggagtatctggcactcagtagatgttataggatacctccacgtgctcttccggat ctgaagaaacttccaactctgtttgccctggatgtgtttggacttctacaagaggagccattccagacgttaaaagaggc attgaagccgattaaaataaaccagtttcctttctccagtatagctagacctaccactggtatacgtagatcaagtttgt ggggactcaaagtcagagataatgtctga |
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Protein
| Protein ID | pfu_aug2.0_82.1_06891.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_82.1_06891.t1 MGCVKLGMLDSDSGGESSPDSGQKHLTPSSTEPSTSRRAPGAPRVLLPSQKENILNSSADNIDPGQPDSSPILRKRGQGH SQVPDDLKCNHFLELSDEIILLILRWLPKFVLAKCARVCHRWHRLVNDESLWRRLDLANKTLSQGALGNIIKKGVQVLRL AKAEIEGPVYSSVPKEITFTPSLSKLQYLDLSMSPATADVLAEIIAVCQDLKKLSLEHCHMSETCCHPPSGRTKSPDQTR ILPIENSPTDENENPPDNAKSPVVNYVTHYAGCSDQLINFQIKSVDANYTGDRYIDGHTKVISAAFSTSSWVFVCPVYVK HFVDHLMERIGHRSVIIPVKGERSPTNQFDNIQDRLEGLNLAWTGLHRHTVVYLALCLTPNLKRLNISGCRENITDEEVL QLCRSCSNLRELDLSDSTVLTHAALTHIEENLFDLEYLALSRCYRIPPRALPDLKKLPTLFALDVFGLLQEEPFQTLKEA LKPIKINQFPFSSIARPTTGIRRSKVLQLCRSCSNLRELDLSDSTVLTHAALTHIEENLFDLEYLALSRCYRIPPRALPD LKKLPTLFALDVFGLLQEEPFQTLKEALKPIKINQFPFSSIARPTTGIRRSSLWGLKVRDNV |
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