Gene
| Gene Model ID | pfu_aug2.0_82.1_06897 |
|---|---|
| Locus | scaffold82.1 : 257452 ... 297160 : + |
| To GenomeBrowser | scaffold82.1:257452..297160 |
| Genes list of scaffold | scaffold82.1 |
| Synonym | pfu_aug1.0_4816.1_30800 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| rho-associated protein kinase 1 | GO:0000166 GO:0004672 GO:0016310 GO:0017048 GO:0022607 GO:0030036 GO:0032970 GO:0035556 GO:0043167 GO:0044087 GO:0051493 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_82.1_06897.t1 | 3 | 1 | Pkinase | 98 | 371 | 0.0 | 192.6 | 0.0 | 0.0 | 192.6 |
| pfu_aug2.0_82.1_06897.t1 | 3 | 1 | Pkinase_Tyr | 100 | 316 | 1.2e-27 | 96.6 | 6.6e-31 | 1.2e-27 | 96.6 |
| pfu_aug2.0_82.1_06897.t1 | 12 | 1 | Rho_Binding | 371 | 409 | 2.2e-11 | 43.8 | 0.4 | 750.0 | 0.5 |
| pfu_aug2.0_82.1_06897.t1 | 12 | 2 | Rho_Binding | 423 | 445 | 2.2e-11 | 43.8 | 7.1 | 13000.0 | -3.5 |
| pfu_aug2.0_82.1_06897.t1 | 12 | 3 | Rho_Binding | 480 | 523 | 2.2e-11 | 43.8 | 0.13 | 240.0 | 2.1 |
| pfu_aug2.0_82.1_06897.t1 | 12 | 4 | Rho_Binding | 519 | 558 | 2.2e-11 | 43.8 | 0.34 | 620.0 | 0.7 |
| pfu_aug2.0_82.1_06897.t1 | 12 | 5 | Rho_Binding | 551 | 593 | 2.2e-11 | 43.8 | 2.0 | 3700.0 | -1.7 |
| pfu_aug2.0_82.1_06897.t1 | 3 | 2 | Pkinase | 624 | 688 | 0.0 | 192.6 | 0.15 | 270.0 | 0.4 |
| pfu_aug2.0_82.1_06897.t1 | 3 | 2 | Pkinase_Tyr | 624 | 665 | 1.2e-27 | 96.6 | 0.96 | 1800.0 | -2.3 |
| pfu_aug2.0_82.1_06897.t1 | 12 | 6 | Rho_Binding | 667 | 682 | 2.2e-11 | 43.8 | 8.0 | 15000.0 | -10.2 |
| pfu_aug2.0_82.1_06897.t1 | 12 | 7 | Rho_Binding | 726 | 769 | 2.2e-11 | 43.8 | 0.033 | 62.0 | 3.9 |
| pfu_aug2.0_82.1_06897.t1 | 12 | 8 | Rho_Binding | 784 | 815 | 2.2e-11 | 43.8 | 1.7 | 3100.0 | -1.5 |
| pfu_aug2.0_82.1_06897.t1 | 12 | 9 | Rho_Binding | 879 | 945 | 2.2e-11 | 43.8 | 1.2e-14 | 2.2e-11 | 43.8 |
| pfu_aug2.0_82.1_06897.t1 | 3 | 3 | Pkinase | 896 | 920 | 0.0 | 192.6 | 3.2 | 5900.0 | -3.9 |
| pfu_aug2.0_82.1_06897.t1 | 3 | 3 | Pkinase_Tyr | 958 | 1024 | 1.2e-27 | 96.6 | 1.4 | 2600.0 | -2.8 |
| pfu_aug2.0_82.1_06897.t1 | 12 | 10 | Rho_Binding | 959 | 985 | 2.2e-11 | 43.8 | 8.0 | 15000.0 | -5.7 |
| pfu_aug2.0_82.1_06897.t1 | 12 | 11 | Rho_Binding | 1008 | 1026 | 2.2e-11 | 43.8 | 2.6 | 4700.0 | -2.1 |
| pfu_aug2.0_82.1_06897.t1 | 12 | 12 | Rho_Binding | 1216 | 1238 | 2.2e-11 | 43.8 | 2.8 | 5300.0 | -2.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_82.1_06897.t1 | gi|512982751|ref|XP_004853360.1| | 0.0 | |
| pfu_aug2.0_82.1_06897.t1 | gi|350413242|ref|XP_003489930.1| | PREDICTED: rho-associated protein kinase 2 [Bombus impatiens] | 0.0 |
| pfu_aug2.0_82.1_06897.t1 | gi|340708620|ref|XP_003392920.1| | PREDICTED: rho-associated protein kinase 2 [Bombus terrestris] | 0.0 |
| pfu_aug2.0_82.1_06897.t1 | gi|645038959|ref|XP_008202546.1| | PREDICTED: rho-associated protein kinase 2 isoform X3 [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_82.1_06897.t1 | gi|617660347|ref|XP_007537142.1| | PREDICTED: rho-associated protein kinase 1 [Erinaceus europaeus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_82.1_06897.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_82.1_06897.t1 atggccagtcattttgatcctgagtacaagatcagattgtcaaagatagaggataagctgaaagatccaaattctgatct taatgtcaacagtttgctggatggattgtctgcccttgttttggatttggactatccagcaatcaaacggaacaagagtg ttgaacagttcctcaacaaatttgttttatgggagaaaagaaattacctcaatagtgtacccactgtgaatgtttcagat gccaagccagtggaatttgtcaacagctgtcggatgaaacatgatgattttgacgtcgtcaaggttatcggaagaggggc cttcggagaagtgcagctggtgcggcacaaatcaacaaagaaagtttacgccatgaagttgctgagtaaaacagagatgg tgcggcacaaatcaacaaagaaagtttacgccatgaagttgctgagtaaaacagagatgataaaacgatcagattccgct ttctactgggaggaaagagaaatcatggcaaatgcaaatagtgaatggattgtgcagctacattatgccttccaagacaa caagttcctctatatggtaatggattatatgccaggtggagacttggtcaatctcatgagtaattacgatgtgccagaga aatgggccaaattctactgtgccgaagtggtgctggcacttaatgccatacatgacatgggctttgttcacagagatgtg aagccagacaacatgttattagacagcaaaggtcaccttaaactagcagattttggaacttgtatgagaatggataggca gacaggtatggtacggtccgatacggcagtgggtaccccagattatatatctccagaggtgctacagtcccagggacgac ctaaccattacggcagggaatgtgattggtggtcagtcggtgtcttcctttacgagatgttagtaggtaggtaccagatg ttagtaggtgacacacccttctacgcagattctttagtcggaacatacggaaaaatcatggatcataaaaattcactcaa ctttccacaagatattgaaatgtcagatagtgccaagagtttaatatgtgcattcctcacagatagagttgctcaaagta atttagacaggatgacagcagaggaaaatagattacaaaaagataggattgagtttgaaagacaaatggcttccaccaaa caagagttgaaagaggcaagcttaaatattgtcttcactaatcacagaaagctgacaatggaacaagaaaacaaaaagca attggaatataaaattcaagacatggagaggaaacttgaccttgagattaaatctcgtaaagagcaatctaatagtaatc aaatggtcaacgagaggatatcatcgctagaaaaaacgatagcagacttaaacgaaaaactcaaagttgaaacagatagt gccaatagattaaagaagaccaatacagaattacagcagagatacaacatatcagaacagaattattctgacttgaatgc caaatactcagatgtctcctcggccagacagcagctggaaaaggaagtgatgaacctgcaagctgaactagaccacgaac gtaatcgctacaaacaagtgaatgaacaagtccttgaactccatgatcgtattgcatcacttcagtctgataaaaggaaa ggagaggaaaaggaaagaaatctcagctcagaaattagacgtatccaggagtcaatagttgtactagaaaagagtaaaaa gcatttagagatagagttagaccagtttagaaggaaactagaagctgagaccaatgctcacaaggagacggtacggagat ttaatgctgacaagaaggacgctctgatgtcaaaggaggaggccaatatcatggctataaaggagatgcaagtaaagtta gaccaggagaagatgacaaaacaaaccatggaaactaagttgatggacgctcagaagaagaactcggagattgtggtgga ccttaaacaatatgaacagcgtgtggagacactgcaacaggagatcaaaatggaaaaagaaaaggccaagaattactcat tacaagtagaacaggaaatccaaagaagaaatttgatgcagggagattttaaaaatcagactcaggacctgtctaagtat aaatccatagagaagcagcttaggaaggaaatttccgacctgagggaggaatgtagaggttatgaaaacgaaatcaggaa attgaaagaagatatgtccataaacgatctacagatgaaggaattacaggaccagctagaggctgaacagtattttagtt ctctgtaccgaactcaagtgaaggaactgaaagaagacgtggaggagaaagataaaaaattacacgactgggcaacggat gctaaaagtgtcgaacaagaaaaagattcctttgcctctcagttacaacttgcccttgccaaagccgattcggagcagct tgccaggtccattgccgaggagcaactatcagacgttgaaaaagagaagactgttttagaattagaaataaaggaactta tcaatcgcaataaaggagagctcacaaagaaagacaaccttgtagcaatgcttgaagattcgaagaatcagtacaagaag cagattgatacattacaagcagaaagagacgatcttactaatgtagtcaaaaaacttcaagacgatctgaggaatatgca gtccaaaccacaaaacgataacgaaattgagaagttaaagaagaatttagaagatgagaaactcaagaaaatacaggctg tcaataaattagcagagattatgaatcgtaaagaattccgaaatcagggtaaaagtaaaaacacagaccagagcgtcaag aagaaagaaaaggagatgaggaaattacagcaggacctgatcatggaaaaagaaaagtacaacaagatggtagagaaata ccagcgtgatttgtcggacacgcaggcagcactttacgaggaacagcagtcgaagggtaaactacaaatggagctagacg ccaaggatagtgagatagagcagttacaacagaaactctccatagctaaccttgataatacctcaataaatagtggcaat ctgacgttagaggatggcgacaccagtgtcactagtctttctccggcagacagtcacatggaaggctatcttgccgtccc caataaagctaatataaagaaatacgggtggaggaagcagtacgtggtggtcagcagtagaaaggtgctattctatgatt ctgaggcggataggcagaatatctccgatcctgtcttagtactagatatagaaaagttatttcatgttcgtcctgttacc caaggagatgtatatagggcagactctaaagatattcctagaattttccaggtgctatatgcaacagagggagagaacag aaggccggacgacagtgcacacgagtcacagatcctggacaagtctggtgctgtgacacataaagggcatgaattcattc ctctacattatcgtacacctaccacatgtgattcctgtaataaacctgtatcgcatatgatacatccaccacaggcactg gaatgtaaaagatgtcattcaaaggttcataaagaccattttgacaaaaatgaagaatttataggatactgcaaagtaaa ctttgaccagaacattaatgccaaggaaatgctactcctggcagaaacggcagaaaagcagaaaaattggatacaacatc tcagcaagaaaatctccaaaaagggaatcgttagctctggtagtttagggccatcacgaggcactagacagtactcatcc tttggtatccaagggagacaaggcaatgcccgatcatcgtcaacgcttccgtcaaactcacgacctacgtag |
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Protein
| Protein ID | pfu_aug2.0_82.1_06897.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_82.1_06897.t1 MASHFDPEYKIRLSKIEDKLKDPNSDLNVNSLLDGLSALVLDLDYPAIKRNKSVEQFLNKFVLWEKRNYLNSVPTVNVSD AKPVEFVNSCRMKHDDFDVVKVIGRGAFGEVQLVRHKSTKKVYAMKLLSKTEMVRHKSTKKVYAMKLLSKTEMIKRSDSA FYWEEREIMANANSEWIVQLHYAFQDNKFLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALNAIHDMGFVHRDV KPDNMLLDSKGHLKLADFGTCMRMDRQTGMVRSDTAVGTPDYISPEVLQSQGRPNHYGRECDWWSVGVFLYEMLVGRYQM LVGDTPFYADSLVGTYGKIMDHKNSLNFPQDIEMSDSAKSLICAFLTDRVAQSNLDRMTAEENRLQKDRIEFERQMASTK QELKEASLNIVFTNHRKLTMEQENKKQLEYKIQDMERKLDLEIKSRKEQSNSNQMVNERISSLEKTIADLNEKLKVETDS ANRLKKTNTELQQRYNISEQNYSDLNAKYSDVSSARQQLEKEVMNLQAELDHERNRYKQVNEQVLELHDRIASLQSDKRK GEEKERNLSSEIRRIQESIVVLEKSKKHLEIELDQFRRKLEAETNAHKETVRRFNADKKDALMSKEEANIMAIKEMQVKL DQEKMTKQTMETKLMDAQKKNSEIVVDLKQYEQRVETLQQEIKMEKEKAKNYSLQVEQEIQRRNLMQGDFKNQTQDLSKY KSIEKQLRKEISDLREECRGYENEIRKLKEDMSINDLQMKELQDQLEAEQYFSSLYRTQVKELKEDVEEKDKKLHDWATD AKSVEQEKDSFASQLQLALAKADSEQLARSIAEEQLSDVEKEKTVLELEIKELINRNKGELTKKDNLVAMLEDSKNQYKK QIDTLQAERDDLTNVVKKLQDDLRNMQSKPQNDNEIEKLKKNLEDEKLKKIQAVNKLAEIMNRKEFRNQGKSKNTDQSVK KKEKEMRKLQQDLIMEKEKYNKMVEKYQRDLSDTQAALYEEQQSKGKLQMELDAKDSEIEQLQQKLSIANLDNTSINSGN LTLEDGDTSVTSLSPADSHMEGYLAVPNKANIKKYGWRKQYVVVSSRKVLFYDSEADRQNISDPVLVLDIEKLFHVRPVT QGDVYRADSKDIPRIFQVLYATEGENRRPDDSAHESQILDKSGAVTHKGHEFIPLHYRTPTTCDSCNKPVSHMIHPPQAL ECKRCHSKVHKDHFDKNEEFIGYCKVNFDQNINAKEMLLLAETAEKQKNWIQHLSKKISKKGIVSSGSLGPSRGTRQYSS FGIQGRQGNARSSSTLPSNSRPT |
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