Gene
| Gene Model ID | pfu_aug2.0_82.1_06898 |
|---|---|
| Locus | scaffold82.1 : 302252 ... 305745 : + |
| To GenomeBrowser | scaffold82.1:302252..305745 |
| Genes list of scaffold | scaffold82.1 |
| Synonym | pfu_aug1.0_88144.1_20691 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| hippocalcin-like protein 1 | GO:0005509 GO:0005515 GO:0042326 GO:0070062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_82.1_06898.t1 | 5 | 1 | EF-hand_6 | 12 | 21 | 3.5e-18 | 63.8 | 7.3 | 7700.0 | -2.7 |
| pfu_aug2.0_82.1_06898.t1 | 3 | 1 | EF-hand_4 | 26 | 93 | 6.4e-07 | 29.0 | 1.0e-05 | 0.011 | 15.4 |
| pfu_aug2.0_82.1_06898.t1 | 2 | 1 | SPARC_Ca_bdg | 28 | 88 | 6.6e-07 | 29.3 | 0.027 | 29.0 | 4.7 |
| pfu_aug2.0_82.1_06898.t1 | 2 | 1 | EF-hand_7 | 46 | 89 | 6.1e-23 | 80.7 | 5.2e-09 | 5.5e-06 | 26.4 |
| pfu_aug2.0_82.1_06898.t1 | 4 | 1 | EF-hand_5 | 46 | 55 | 1.5e-19 | 68.4 | 0.25 | 260.0 | 1.2 |
| pfu_aug2.0_82.1_06898.t1 | 5 | 2 | EF-hand_6 | 46 | 58 | 3.5e-18 | 63.8 | 0.42 | 440.0 | 1.2 |
| pfu_aug2.0_82.1_06898.t1 | 4 | 1 | EF-hand_1 | 47 | 57 | 4.4e-24 | 81.8 | 0.97 | 1000.0 | -0.6 |
| pfu_aug2.0_82.1_06898.t1 | 2 | 1 | EF-hand_8 | 47 | 92 | 5.5e-17 | 61.1 | 3.8e-08 | 4.0e-05 | 23.1 |
| pfu_aug2.0_82.1_06898.t1 | 4 | 2 | EF-hand_1 | 69 | 92 | 4.4e-24 | 81.8 | 6.6e-10 | 7.0e-07 | 28.1 |
| pfu_aug2.0_82.1_06898.t1 | 4 | 2 | EF-hand_5 | 70 | 88 | 1.5e-19 | 68.4 | 2.6e-07 | 0.00027 | 20.1 |
| pfu_aug2.0_82.1_06898.t1 | 5 | 3 | EF-hand_6 | 70 | 92 | 3.5e-18 | 63.8 | 2.5e-07 | 0.00027 | 20.5 |
| pfu_aug2.0_82.1_06898.t1 | 3 | 2 | EF-hand_4 | 101 | 135 | 6.4e-07 | 29.0 | 0.00013 | 0.14 | 11.9 |
| pfu_aug2.0_82.1_06898.t1 | 2 | 2 | SPARC_Ca_bdg | 101 | 171 | 6.6e-07 | 29.3 | 1.3e-07 | 0.00013 | 21.9 |
| pfu_aug2.0_82.1_06898.t1 | 4 | 3 | EF-hand_1 | 105 | 130 | 4.4e-24 | 81.8 | 7.0e-11 | 7.4e-08 | 31.1 |
| pfu_aug2.0_82.1_06898.t1 | 2 | 2 | EF-hand_7 | 105 | 172 | 6.1e-23 | 80.7 | 4.2e-18 | 4.5e-15 | 55.5 |
| pfu_aug2.0_82.1_06898.t1 | 4 | 3 | EF-hand_5 | 107 | 126 | 1.5e-19 | 68.4 | 9.2e-09 | 9.8e-06 | 24.6 |
| pfu_aug2.0_82.1_06898.t1 | 5 | 4 | EF-hand_6 | 107 | 129 | 3.5e-18 | 63.8 | 5.6e-08 | 5.9e-05 | 22.6 |
| pfu_aug2.0_82.1_06898.t1 | 2 | 2 | EF-hand_8 | 116 | 173 | 5.5e-17 | 61.1 | 4.2e-13 | 4.5e-10 | 38.9 |
| pfu_aug2.0_82.1_06898.t1 | 3 | 3 | EF-hand_4 | 147 | 184 | 6.4e-07 | 29.0 | 0.093 | 99.0 | 2.7 |
| pfu_aug2.0_82.1_06898.t1 | 4 | 4 | EF-hand_1 | 151 | 175 | 4.4e-24 | 81.8 | 1.1e-08 | 1.2e-05 | 24.2 |
| pfu_aug2.0_82.1_06898.t1 | 4 | 4 | EF-hand_5 | 152 | 171 | 1.5e-19 | 68.4 | 7.9e-08 | 8.3e-05 | 21.7 |
| pfu_aug2.0_82.1_06898.t1 | 5 | 5 | EF-hand_6 | 152 | 175 | 3.5e-18 | 63.8 | 9.2e-07 | 0.00097 | 18.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_82.1_06898.t1 | gi|91093203|ref|XP_969368.1| | PREDICTED: neurocalcin homolog [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_82.1_06898.t1 | gi|664717558|ref|XP_008515785.1| | PREDICTED: hippocalcin-like protein 1 [Equus przewalskii] | 0.0 |
| pfu_aug2.0_82.1_06898.t1 | gi|640814011|ref|XP_008063723.1| | PREDICTED: hippocalcin-like protein 1 [Tarsius syrichta] | 0.0 |
| pfu_aug2.0_82.1_06898.t1 | gi|19913441|ref|NP_002140.2| | hippocalcin-like protein 1 [Homo sapiens] | 0.0 |
| pfu_aug2.0_82.1_06898.t1 | gi|327261307|ref|XP_003215472.1| | PREDICTED: hippocalcin-like protein 1 [Anolis carolinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_82.1_06898.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_82.1_06898.t1 atgggaaataaagctgcgaaactaagtccaaaaaccgtggaacagttacaaaagcacatgaatgtcgatttcaccagcca agaaatcaaagactggtaccaggagtatcaaaaatccctgtcctctggagaaacacagttatcgagagatgattttaaac gagtgtatgacaaaatgttttctggcgatgcaacttcttttgccgagcaagttttccgtagttttgacataaatgggaac ggatatgtcgatttccaggagtttatagtgggtttgtcaatttctagtagtccaaacaacgagacgaaatgggcatgggc tttcagtatgtatgatattgacggtgatggatttatttcacgggaagagatgtcacacattatgaaggcaattttctcga tggcagaattcaagcttccaaaaggatataaaaccacagacgaatatacagacgatattttcaaatcaatcgatactaat caggatggattaattagccaagaggagtttattaacggagccaagacaaatcccgtcatcatcgatctcttacagccaaa tcctgaagctgatgatgacaacgaggactgttatgagtag |
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Protein
| Protein ID | pfu_aug2.0_82.1_06898.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_82.1_06898.t1 MGNKAAKLSPKTVEQLQKHMNVDFTSQEIKDWYQEYQKSLSSGETQLSRDDFKRVYDKMFSGDATSFAEQVFRSFDINGN GYVDFQEFIVGLSISSSPNNETKWAWAFSMYDIDGDGFISREEMSHIMKAIFSMAEFKLPKGYKTTDEYTDDIFKSIDTN QDGLISQEEFINGAKTNPVIIDLLQPNPEADDDNEDCYE |
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