Gene
| Gene Model ID | pfu_aug2.0_82.1_06904 |
|---|---|
| Locus | scaffold82.1 : 505081 ... 519229 : - |
| To GenomeBrowser | scaffold82.1:505081..519229 |
| Genes list of scaffold | scaffold82.1 |
| Synonym | pfu_aug1.0_41377.1_48445 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| caspase-7 isoform x2 | GO:0004175 GO:0008234 GO:0044699 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_82.1_06904.t1 | 2 | 1 | Peptidase_C14 | 1 | 119 | 5.3e-26 | 91.8 | 3.6e-15 | 1.8e-11 | 44.2 |
| pfu_aug2.0_82.1_06904.t1 | 2 | 2 | Peptidase_C14 | 203 | 391 | 5.3e-26 | 91.8 | 6.3e-16 | 3.1e-12 | 46.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_82.1_06904.t1 | gi|676474269|ref|XP_009060092.1| | hypothetical protein LOTGIDRAFT_154123 [Lottia gigantea] | 2.0e-16 |
| pfu_aug2.0_82.1_06904.t1 | gi|676473821|ref|XP_009059944.1| | hypothetical protein LOTGIDRAFT_74313, partial [Lottia gigantea] | 8.0e-15 |
| pfu_aug2.0_82.1_06904.t1 | gi|632976958|ref|XP_007905079.1| | PREDICTED: caspase-3 [Callorhinchus milii] | 2.0e-14 |
| pfu_aug2.0_82.1_06904.t1 | gi|148225638|ref|NP_001081408.1| | caspase-7 [Xenopus laevis] | 5.0e-14 |
| pfu_aug2.0_82.1_06904.t1 | gi|637306656|ref|XP_008110025.1| | PREDICTED: caspase-3 [Anolis carolinensis] | 6.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_82.1_06904.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_82.1_06904.t1 atgacgtcatcattttctgaactcggctttctggtgctggcttttaaggacctagacgtacagaccatgatgtctgttct caaatatgtatctactttagaagatatccataaagagtcagatgcttttgcattttccatagggacgcatggagaagaat tctttgattggaaaacatatatgtatgaacatatactgtacggcacagatacacacatctccacaaaagacgtacttaac atatttaaagataaaaattgtaaatctctcaaaggaaaaccaaggctcttctttttgcaggcgtgtagaagtcatcatca tgaaagttttgacactggtgtaccagtagaggtgatatctgtaaatgacagaggtgaagtcaaacaggtgccatgcgaag aagatgaaaaggagaaagtcgaagaatctttttcaactgatacttttgatggttcaatcattgagggatggaaattaaaa ttcaaagcattgtgttcagtcggaaaaacaaaagggtggagaggaattacgactgtggcgtgtccaaatcatttttgcat attatatgccactagtcctgttgcaagcttgacagattttcatgctaaatcagccatgtttgcctgtgccataggatctc atggtgaggaagttgaagtcaaggataagagacaggatggagagcacacatcttatgatcacttgattcacgggacagac tttccgattccaactaaattacttgtcaatatattttccagtaggaactgcagaacactgaaagggaaaccaagattatt tttcatccaggcgtgtagaagtcatcatcatgaaagttttgacactggtgtaccaatagaggtgaaatccgtaaatgaca gaggtgaagtcaaacaggtgccatgcgaagaagatgaaaaggagaaagtcgaagaatctttttcagctgatacttttgat ggttcaatcattgagggatggaaagtcaaattaaaagcattgtgttcagtcggaaaaacaaaagagtggagaggagatac gactgtggcgtgtccaaatcatttttgcatattatatgccactgccactggtaaatatgctcttggcaggaaaaatgaag gaggctggatgctcatgaaggtgtctgaagccctgatagaagcttttcattcgctcaaacgacatgaagtatcagaagtt gacattctgcagaccttgactgtgtccattcatgaagtggccttcacaatgaaatccaagcatccaaatcaagacgtccc gagtgaccagcctagttatatctacactgctccgtgtttggaacatcgactgaatcgaagcattgtattcagaaagtga |
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Protein
| Protein ID | pfu_aug2.0_82.1_06904.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_82.1_06904.t1 MTSSFSELGFLVLAFKDLDVQTMMSVLKYVSTLEDIHKESDAFAFSIGTHGEEFFDWKTYMYEHILYGTDTHISTKDVLN IFKDKNCKSLKGKPRLFFLQACRSHHHESFDTGVPVEVISVNDRGEVKQVPCEEDEKEKVEESFSTDTFDGSIIEGWKLK FKALCSVGKTKGWRGITTVACPNHFCILYATSPVASLTDFHAKSAMFACAIGSHGEEVEVKDKRQDGEHTSYDHLIHGTD FPIPTKLLVNIFSSRNCRTLKGKPRLFFIQACRSHHHESFDTGVPIEVKSVNDRGEVKQVPCEEDEKEKVEESFSADTFD GSIIEGWKVKLKALCSVGKTKEWRGDTTVACPNHFCILYATATGKYALGRKNEGGWMLMKVSEALIEAFHSLKRHEVSEV DILQTLTVSIHEVAFTMKSKHPNQDVPSDQPSYIYTAPCLEHRLNRSIVFRK |
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