Gene
| Gene Model ID | pfu_aug2.0_824.1_14583 |
|---|---|
| Locus | scaffold824.1 : 17046 ... 27825 : + |
| To GenomeBrowser | scaffold824.1:17046..27825 |
| Genes list of scaffold | scaffold824.1 |
| Synonym | pfu_aug1.0_19603.1_04020 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_824.1_14583.t1 | 3 | 1 | Pkinase | 39 | 174 | 2.1e-27 | 95.9 | 6.6e-29 | 4.9e-25 | 88.1 |
| pfu_aug2.0_824.1_14583.t1 | 3 | 1 | Pkinase_Tyr | 39 | 174 | 2.2e-27 | 95.8 | 2.3e-23 | 1.7e-19 | 69.8 |
| pfu_aug2.0_824.1_14583.t1 | 3 | 2 | Pkinase_Tyr | 223 | 285 | 2.2e-27 | 95.8 | 2.2e-10 | 1.6e-06 | 27.3 |
| pfu_aug2.0_824.1_14583.t1 | 3 | 2 | Pkinase | 235 | 284 | 2.1e-27 | 95.9 | 0.00098 | 7.3 | 5.6 |
| pfu_aug2.0_824.1_14583.t1 | 3 | 3 | Pkinase | 600 | 624 | 2.1e-27 | 95.9 | 0.63 | 4600.0 | -3.6 |
| pfu_aug2.0_824.1_14583.t1 | 3 | 3 | Pkinase_Tyr | 604 | 626 | 2.2e-27 | 95.8 | 0.98 | 7200.0 | -4.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_824.1_14583.t1 | gi|585708481|ref|XP_006824176.1| | PREDICTED: ankyrin repeat and protein kinase domain-containing protein 1-like [Saccoglossus kowalevskii] | 1.0e-29 |
| pfu_aug2.0_824.1_14583.t1 | gi|260788688|ref|XP_002589381.1| | hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae] | 8.0e-29 |
| pfu_aug2.0_824.1_14583.t1 | gi|260788682|ref|XP_002589378.1| | hypothetical protein BRAFLDRAFT_77821 [Branchiostoma floridae] | 4.0e-28 |
| pfu_aug2.0_824.1_14583.t1 | gi|260788694|ref|XP_002589384.1| | hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae] | 1.0e-27 |
| pfu_aug2.0_824.1_14583.t1 | gi|585702893|ref|XP_006823146.1| | PREDICTED: receptor-interacting serine/threonine-protein kinase 2-like [Saccoglossus kowalevskii] | 2.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_824.1_14583.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_824.1_14583.t1 atgatactgttaggaaaatttctcatgcgagtctcacgtgagaaaggccctgaaatggcaggggagcatgagattccaat tgtccaatggaatgagcttcagttagaggagatccccatagggaggggagggtatggtaccgtgtacagggggacacacc ctcactttggaatggtggccatcaaaaccctcatcaacaatggtcagctacctcaaaaacatatagatgttttacaacaa gaggcccagaagttacgtgagctctgtcagcatgaggggatcctagatctacatggactggtaatggagcgagacaatta ctctctgatcttggagtacatgccccttggaagtctgacggagttcaggaaggagttttccgtacagtttccgttatttg tccgtatggccaaggaggtggtttcagcattagcctacttacatggccgtgatccccaggtcttgcatctggatcttaag gcagataatattctattggataaacacataagtgccaagcttgttacacatatagctgtaccatatggcagtaagtttgt tacacacatagctgtaccatatgacagtaagtttgttacacatatagctatgccatatggtagtaagtttgttacgcata aagctgtgccatattgcagtaagtttgttacatatgaagctgtaccatatgacaatgccagagatgacttaattaggtca gcagttttaacgggtcagcgacctgacctcacccaggtacctaaggggtgtcctcctgtattaatgacacttatgacctg ctgctggcaccaaaaaccaactaaaagaccagccttctctgatttaaagaaagaaatggatacagtttatgatgaagaat ttaaaagacaaattgttggcagtcttaaggcaatacgccaggaaattgttacacattatccacctgatgatcctgttaac acctgtacatctgaaattgataacttatctgacacccccgaggagcctgaaccaatggatgagtctggaccttctacttc acaaaatgtgaaagagtccacgacagaaaaggggagtgaggatgatgagatggagggagaaaatccatacctctctgaag gtgttttaatgaaagatgaatcaaaaatggacgtttatgaacaaaatttacggaaaatattacgtgaccctgctgcttta agaatagcacggactaaatatattagtgaacttttccctgtgaataaaaggattaaagaaatactgaatgacaatgagaa agtgaagcagtacatagaatctgacacgttatttagaaaagaaatattttacccaggtaataatttctgggttaatttat gtggaggacatttcagaatggcaaagcatctctcccaaaattatactgaagtatatagtgatgatttggagggtacgcag agatttggtagatacggtagaacaagttggggagcacagaaagaagatacgccacgtatgaaaagacgtgcaaggattga caaaatgcacgacgaacactccctgctaagggacatgaagaaaggaggtaaggaatattcggggttactcatgaaacttg tggctaaagccaagaagggaaatgccaccccaatgtacagagatctgcccatgtttatgcagcgtgagatgatgtatgag gacatggatatgatggaccctgacgagttaatgatgatgagggagatggagatgagacgacgacgacatcacatgacggg tgatgatgatgacgatgatttcatgaagagcatggcgatcagacggcaaatgatgaaggaaatgagacctagacgtatgg aatcgtcaaagaaaatgtcaaagatgatgaaatcttcacatgaaaaacctgtatctttgtcccgaacagcagcagactct tcatcttctgagaaatcttcaacatcaagtggacctagttcaactatgtcatctacacaactggcaggtactagctctgg taatgttactcccacatctactgggtcacagtcaagttctgatggtacaggtaaagcgaaggataaacacaaagctaaga gacaaggggacaattcacagggaaagaaagacgatacagattccagtaaatgtgctcatcagtga |
|
Protein
| Protein ID | pfu_aug2.0_824.1_14583.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_824.1_14583.t1 MILLGKFLMRVSREKGPEMAGEHEIPIVQWNELQLEEIPIGRGGYGTVYRGTHPHFGMVAIKTLINNGQLPQKHIDVLQQ EAQKLRELCQHEGILDLHGLVMERDNYSLILEYMPLGSLTEFRKEFSVQFPLFVRMAKEVVSALAYLHGRDPQVLHLDLK ADNILLDKHISAKLVTHIAVPYGSKFVTHIAVPYDSKFVTHIAMPYGSKFVTHKAVPYCSKFVTYEAVPYDNARDDLIRS AVLTGQRPDLTQVPKGCPPVLMTLMTCCWHQKPTKRPAFSDLKKEMDTVYDEEFKRQIVGSLKAIRQEIVTHYPPDDPVN TCTSEIDNLSDTPEEPEPMDESGPSTSQNVKESTTEKGSEDDEMEGENPYLSEGVLMKDESKMDVYEQNLRKILRDPAAL RIARTKYISELFPVNKRIKEILNDNEKVKQYIESDTLFRKEIFYPGNNFWVNLCGGHFRMAKHLSQNYTEVYSDDLEGTQ RFGRYGRTSWGAQKEDTPRMKRRARIDKMHDEHSLLRDMKKGGKEYSGLLMKLVAKAKKGNATPMYRDLPMFMQREMMYE DMDMMDPDELMMMREMEMRRRRHHMTGDDDDDDFMKSMAIRRQMMKEMRPRRMESSKKMSKMMKSSHEKPVSLSRTAADS SSSEKSSTSSGPSSTMSSTQLAGTSSGNVTPTSTGSQSSSDGTGKAKDKHKAKRQGDNSQGKKDDTDSSKCAHQ |
|