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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_824.1_14585
Locus scaffold824.1 : 45166 ... 47056 : +
To GenomeBrowser scaffold824.1:45166..47056
Genes list of scaffold scaffold824.1
Synonym pfu_aug1.0_345.1_58082

Manual annotation
Annotation by Blast2GO
Annotation GO
nf-kappa-b inhibitor cactus-like GO:0005515 GO:0019732 GO:0044765 GO:0048477 GO:0048731 GO:0050794 GO:0051716

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_824.1_14585.t1 4 1 Ank_2 134 200 1.4013e-45 154.3 2.3e-07 0.00057 20.1
pfu_aug2.0_824.1_14585.t1 6 1 Ank_4 134 156 1.5e-25 89.1 0.0001 0.26 11.8
pfu_aug2.0_824.1_14585.t1 6 1 Ank_5 139 163 6.5e-26 89.7 0.0046 11.0 6.3
pfu_aug2.0_824.1_14585.t1 6 1 Ank 142 163 7.20001e-41 136.0 0.0002 0.49 10.3
pfu_aug2.0_824.1_14585.t1 6 1 Ank_3 142 164 7.8e-32 106.1 0.0021 5.3 7.5
pfu_aug2.0_824.1_14585.t1 4 2 Ank_2 147 233 1.4013e-45 154.3 2.7e-15 6.6e-12 45.6
pfu_aug2.0_824.1_14585.t1 6 2 Ank_5 174 220 6.5e-26 89.7 3.8e-08 9.5e-05 22.5
pfu_aug2.0_824.1_14585.t1 6 2 Ank 181 209 7.20001e-41 136.0 2.2e-07 0.00056 19.5
pfu_aug2.0_824.1_14585.t1 6 2 Ank_3 181 205 7.8e-32 106.1 0.0012 3.0 8.3
pfu_aug2.0_824.1_14585.t1 6 2 Ank_4 181 200 1.5e-25 89.1 0.0046 11.0 6.6
pfu_aug2.0_824.1_14585.t1 6 3 Ank_4 182 232 1.5e-25 89.1 5.4e-08 0.00013 22.3
pfu_aug2.0_824.1_14585.t1 6 3 Ank 212 233 7.20001e-41 136.0 1.4e-07 0.00035 20.2
pfu_aug2.0_824.1_14585.t1 6 3 Ank_3 212 232 7.8e-32 106.1 1.6e-06 0.0039 17.2
pfu_aug2.0_824.1_14585.t1 6 3 Ank_5 212 230 6.5e-26 89.7 2.9e-05 0.071 13.3
pfu_aug2.0_824.1_14585.t1 6 4 Ank_5 252 295 6.5e-26 89.7 6.8e-09 1.7e-05 24.9
pfu_aug2.0_824.1_14585.t1 6 4 Ank_4 257 284 1.5e-25 89.1 1.2e-07 0.00029 21.2
pfu_aug2.0_824.1_14585.t1 6 4 Ank 263 294 7.20001e-41 136.0 5.5e-14 1.4e-10 40.4
pfu_aug2.0_824.1_14585.t1 6 4 Ank_3 263 292 7.8e-32 106.1 1.3e-10 3.2e-07 29.9
pfu_aug2.0_824.1_14585.t1 4 3 Ank_2 264 323 1.4013e-45 154.3 5.8e-16 1.4e-12 47.7
pfu_aug2.0_824.1_14585.t1 4 4 Ank_2 268 358 1.4013e-45 154.3 9.7e-23 2.4e-19 69.4
pfu_aug2.0_824.1_14585.t1 6 5 Ank_4 280 318 1.5e-25 89.1 4.9e-09 1.2e-05 25.6
pfu_aug2.0_824.1_14585.t1 6 5 Ank_5 289 319 6.5e-26 89.7 1.2e-06 0.0029 17.7
pfu_aug2.0_824.1_14585.t1 6 5 Ank 298 320 7.20001e-41 136.0 7.2e-07 0.0018 18.0
pfu_aug2.0_824.1_14585.t1 6 5 Ank_3 298 321 7.8e-32 106.1 8.1e-07 0.002 18.1
pfu_aug2.0_824.1_14585.t1 6 6 Ank_5 326 360 6.5e-26 89.7 2.4e-06 0.006 16.8
pfu_aug2.0_824.1_14585.t1 6 6 Ank 331 357 7.20001e-41 136.0 6.1e-10 1.5e-06 27.6
pfu_aug2.0_824.1_14585.t1 6 6 Ank_3 331 362 7.8e-32 106.1 3.6e-08 8.9e-05 22.3
pfu_aug2.0_824.1_14585.t1 6 6 Ank_4 332 357 1.5e-25 89.1 0.00015 0.36 11.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_824.1_14585.t1 gi|242014214|ref|XP_002427786.1| NF-kappa-B inhibitor alpha, putative [Pediculus humanus corporis] 9.94922e-44

Transcript
Transcript IDpfu_aug2.0_824.1_14585.t1
Definition-
>pfu_aug2.0_824.1_14585.t1
atggcgagtcgtttagattttgacgacctcgaagttgacggggaagggagcacgagtacgtcagcacggaggatccacaa
gtgcccgttattaaacgaaaagtcacaatgtcaagaccgtgtggattctggtattagttctatgacattctcatctagtg
acagtgtgatttctgagattcgaagtcaaattagtagatgtaatagtaatggacaagaacaaagtacggagggcagtacg
gacattaattcagggtgtgattcattagacaatgtgacaaagaaattaagggacactgtcttggaagaggatgaagatga
aggaatatcttcttttgatccagataatgtgcctataaaaaagtgtacaaaggtcacagatagaataacggatgaagctt
tagaagtatacggtcgtgatattgatggagacactctcttgcacatctctatcattcacggaaataataaaatcacgaga
gaattcattcgtttggcaccatggaataactggttagacatttacaatgaaaaactacgtcaaacgcccctccatttagc
ggcacttaccgaaaatgcagtaatcgctcgagcactacttgtcggaggagcaaacccagagttctgtgatcacaatgggg
ataccgcacttcatattgcttgtcggaaaggacatgttcctgtcgtaggagctttaatgaagcctattacatcaccggaa
actgcacatgtggagtatgaatacaccctgaagcacattccacaaaatctcgaattgcgaaactccgacggcttcacttg
cttacacctttctgcggaaaatggacacaaagacattttgcaagcattgatatcgcgaggtgcagacgtgaatgcagggg
acagcaagactggattctccgttctacacattgcagctcgtaaaaatgacattcaaatggcaagatttttgcttcgatgt
cgtggactgaaagttgacaaagaaagttacaatggaacaacacctctcatgcttgcagtttctcacaggaacaatgaaat
gattcatctattactgcaggcaggagcgaagatgagagacataaacgactttgatgacagcttgagtgacgaagaataa

Protein
Protein IDpfu_aug2.0_824.1_14585.t1
Definition-
>pfu_aug2.0_824.1_14585.t1
MASRLDFDDLEVDGEGSTSTSARRIHKCPLLNEKSQCQDRVDSGISSMTFSSSDSVISEIRSQISRCNSNGQEQSTEGST
DINSGCDSLDNVTKKLRDTVLEEDEDEGISSFDPDNVPIKKCTKVTDRITDEALEVYGRDIDGDTLLHISIIHGNNKITR
EFIRLAPWNNWLDIYNEKLRQTPLHLAALTENAVIARALLVGGANPEFCDHNGDTALHIACRKGHVPVVGALMKPITSPE
TAHVEYEYTLKHIPQNLELRNSDGFTCLHLSAENGHKDILQALISRGADVNAGDSKTGFSVLHIAARKNDIQMARFLLRC
RGLKVDKESYNGTTPLMLAVSHRNNEMIHLLLQAGAKMRDINDFDDSLSDEE

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