Gene
| Gene Model ID | pfu_aug2.0_824.1_14586 |
|---|---|
| Locus | scaffold824.1 : 55615 ... 74725 : - |
| To GenomeBrowser | scaffold824.1:55615..74725 |
| Genes list of scaffold | scaffold824.1 |
| Synonym | pfu_aug1.0_345.1_58083 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| translocon-associated protein subunit alpha | GO:0005789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_824.1_14586.t1 | 2 | 1 | TRAP_alpha | 25 | 60 | 0.0 | 343.0 | 0.21 | 1500.0 | -2.2 |
| pfu_aug2.0_824.1_14586.t1 | 2 | 2 | TRAP_alpha | 66 | 334 | 0.0 | 343.0 | 0.0 | 0.0 | 343.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_824.1_14586.t1 | gi|524868994|ref|XP_005091294.1| | PREDICTED: translocon-associated protein subunit alpha-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_824.1_14586.t1 | gi|676432969|ref|XP_009046747.1| | hypothetical protein LOTGIDRAFT_138147, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_824.1_14586.t1 | gi|746851894|ref|XP_011056485.1| | PREDICTED: translocon-associated protein subunit alpha [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_824.1_14586.t1 | gi|751206075|ref|XP_011155546.1| | PREDICTED: translocon-associated protein subunit alpha [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_824.1_14586.t1 | gi|759052898|ref|XP_011335598.1| | PREDICTED: translocon-associated protein subunit alpha [Cerapachys biroi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_824.1_14586.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_824.1_14586.t1 atgaaggaatgtatgagggaggaatctgaaaggatggaaggtatgaagaaggaatctgaatggatggaaagtatgaagga ggaatctgaaatggaggaatttatgagggagaaatctggaatgaaggaatgtatgagggaggaatctgaaaggatggaaa gtatgaaggaggaatttgaaaggatggaatgtatgaaggaggaatctgaaatggaggaaggtatgaaggaggaatctgaa aggatgaaaggtatgaaggaggaatctgaaatgatgggaggtatgagggaggaatctgaaatcgaggaagaagaggaaga tgaaggcgacgaagaagaggagagtcgactacagccatcaccagatgtagataccgtcattctcttcacaaagccacaag gaacaactgatcttcctgctggagatacagtgaggttcctggtaggatttaccaacaaggggaactcaaagtttacagtg gaaacattggaggcctccttcagatatcctcaggactacagcttctttattcaaaatttcactgctgcccagtacaataa ggaagttgaggggcagagacaggcatcgtttgagtatggattctcacctaatgaagcattcgctggcaggccgtttggat tgtccatcctccttaattacaaggacgaagaaggtaaacagttccagagtgctgtgtttaatgagacggttaacattgtg gagcctgatgaaggactagatggagaaactttcttcctgtacgttttcttggctgccctggtggttttgctacttgtcgg agctcagcagcttttagggtcactaagcagaaaacatttatcaaaaccccgcccccctgtagagagaggaacacagaata cagatgtagactacgattggatccccgaggagactatcaagatggagaatttaaaccggtcaccggggcgatctcccaag aaatcgccccgtcagaggaagaacaagagaactgccggatccggagaagaataa |
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Protein
| Protein ID | pfu_aug2.0_824.1_14586.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_824.1_14586.t1 MKECMREESERMEGMKKESEWMESMKEESEMEEFMREKSGMKECMREESERMESMKEEFERMECMKEESEMEEGMKEESE RMKGMKEESEMMGGMREESEIEEEEEDEGDEEEESRLQPSPDVDTVILFTKPQGTTDLPAGDTVRFLVGFTNKGNSKFTV ETLEASFRYPQDYSFFIQNFTAAQYNKEVEGQRQASFEYGFSPNEAFAGRPFGLSILLNYKDEEGKQFQSAVFNETVNIV EPDEGLDGETFFLYVFLAALVVLLLVGAQQLLGSLSRKHLSKPRPPVERGTQNTDVDYDWIPEETIKMENLNRSPGRSPK KSPRQRKNKRTAGSGEE |
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