Gene
| Gene Model ID | pfu_aug2.0_824.1_14587 |
|---|---|
| Locus | scaffold824.1 : 77256 ... 122410 : + |
| To GenomeBrowser | scaffold824.1:77256..122410 |
| Genes list of scaffold | scaffold824.1 |
| Synonym | pfu_aug1.0_345.1_58084 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ataxin-1 isoform x1 | GO:0000122 GO:0003677 GO:0003682 GO:0005737 GO:0008022 GO:0008266 GO:0008344 GO:0008542 GO:0016363 GO:0034046 GO:0042272 GO:0042326 GO:0042405 GO:0042802 GO:0043569 GO:0043621 GO:0045944 GO:0048286 GO:0051168 GO:0060079 GO:0060252 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_824.1_14587.t1 | 1 | 1 | AXH | 372 | 486 | 5.60519e-45 | 152.3 | 0.0 | 1.26117e-44 | 151.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_824.1_14587.t1 | gi|524868992|ref|XP_005091293.1| | PREDICTED: mucin-19-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_824.1_14587.t1 | gi|676432972|ref|XP_009046748.1| | hypothetical protein LOTGIDRAFT_58018, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_824.1_14587.t1 | gi|148709073|gb|EDL41019.1| | ataxin 1, partial [Mus musculus] | 0.0 |
| pfu_aug2.0_824.1_14587.t1 | gi|33636696|ref|NP_033150.2| | ataxin-1 isoform b [Mus musculus] | 0.0 |
| pfu_aug2.0_824.1_14587.t1 | gi|632968929|ref|XP_007900806.1| | PREDICTED: ataxin-1 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_824.1_14587.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_824.1_14587.t1 atgactggtagtacacccggaagtaatggagaaaatctaaattggttaactgatgtctcatcttgtcaaggtatagtaca gaggccttccgatagcttacacacttcttcagttagcggacaaagtaattattctacgtctagatcgtctacaatgttag cttccgccgcgtcgcccggtggaatgccgggagttttccgtccccctatgacgttgtccgatgcctcagctagacttctc tcaggcggtagtagtcagttcccaacgttatactcggcacctggaaaccgaggcagtagttctcagctttcgccgtacct aggcggacacgatgcctcgaccgggcagagcgcgcacctttcaccacactacagcgccttttacacgtcacagtatccta actacccgagccgggcgttactgacaaatcctaattacccgcacatcgagtcttactcggccgtactgcagagtatggga agtcaagttcaacaatcctctcatacacagctacctcgtaatacgtacggacatgtgtcacagtattcccttatgggaac atctcatcagagatccatgtcagcctcggtgtccccaagtcccgaggttgcctcgcatcatgcgcccgcgaaccccggga attccatcgtgggacacggggaggcaattccgtctgatctcaaatcacgaattgatattagggagagaaaactccacgaa caagaatatttatctcacattaaggaggagagaactcacagtctttcagcgattgaactctcgggaggaaaatccgtttc ttttaaggaccctccccacagggatttagtttctacaaaagattctaactataaagtgcctagtgggaaggaaggtagtt tgaagcacaggattttaacccgcccctctgatagtgcaatacaaagctctatggtggattctcgttactcatcctacgca tcgcaacaaatatcagacgaaccatccgctaaacgatcaaagtacagtacgagtagcgcggcaccctccaaatccacaca ttccgcggaagtggcgagtggaaatattagttctgctgcttcgccgcaatctcagctacattaccctccacatttcatga aaggatctataattcagttaacaaacggtgaattaaaacgtgtagaggaccttcaaactgaggattttgtacaaagtgct gaaattagtgatgatctcaaaatagactccagtactgtggtgaaaatagaagagagtgtggacagagggactgccatact aggcttcgtagtaggagaacacaaagtccaggtgacagtagaagcgacgttggagcacccgttctttgtgtttggccagg gctggtcatcgtgtgagccggacaggactttacagcgttatggactagaatgtcagaggttgtctgtgggtgacgtctgt atctcactgacgcataaagacgtcaccgcccacgctgccgaaatatcccaacaacaacgccagctacagctgaaaaatca acaaagtccgcaccaagtgccctccccttcttctaaccctgcctcacagaggtcaccgaaggattctcaaggtcaaggac attcagtgcctagccctaataatagatcagggaattccccatttccaactcaggatcactacgatgctgtcaatcgacct ccacgtaaacgtaactggtcatcatctagcttacatgaaaacgagagtggtaatgtaggtcaaggggattcccccagaga catcaaacctactacaaactga |
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Protein
| Protein ID | pfu_aug2.0_824.1_14587.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_824.1_14587.t1 MTGSTPGSNGENLNWLTDVSSCQGIVQRPSDSLHTSSVSGQSNYSTSRSSTMLASAASPGGMPGVFRPPMTLSDASARLL SGGSSQFPTLYSAPGNRGSSSQLSPYLGGHDASTGQSAHLSPHYSAFYTSQYPNYPSRALLTNPNYPHIESYSAVLQSMG SQVQQSSHTQLPRNTYGHVSQYSLMGTSHQRSMSASVSPSPEVASHHAPANPGNSIVGHGEAIPSDLKSRIDIRERKLHE QEYLSHIKEERTHSLSAIELSGGKSVSFKDPPHRDLVSTKDSNYKVPSGKEGSLKHRILTRPSDSAIQSSMVDSRYSSYA SQQISDEPSAKRSKYSTSSAAPSKSTHSAEVASGNISSAASPQSQLHYPPHFMKGSIIQLTNGELKRVEDLQTEDFVQSA EISDDLKIDSSTVVKIEESVDRGTAILGFVVGEHKVQVTVEATLEHPFFVFGQGWSSCEPDRTLQRYGLECQRLSVGDVC ISLTHKDVTAHAAEISQQQRQLQLKNQQSPHQVPSPSSNPASQRSPKDSQGQGHSVPSPNNRSGNSPFPTQDHYDAVNRP PRKRNWSSSSLHENESGNVGQGDSPRDIKPTTN |
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