Gene
| Gene Model ID | pfu_aug2.0_824.1_14588 |
|---|---|
| Locus | scaffold824.1 : 130230 ... 140665 : - |
| To GenomeBrowser | scaffold824.1:130230..140665 |
| Genes list of scaffold | scaffold824.1 |
| Synonym | pfu_aug1.0_345.1_58085 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_824.1_14588.t1 | 2 | 1 | BCNT | 89 | 101 | 6.0e-28 | 96.6 | 0.54 | 4000.0 | -2.2 |
| pfu_aug2.0_824.1_14588.t1 | 2 | 2 | BCNT | 210 | 280 | 6.0e-28 | 96.6 | 8.1e-32 | 6.0e-28 | 96.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_824.1_14588.t1 | gi|524910003|ref|XP_005109892.1| | PREDICTED: craniofacial development protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_824.1_14588.t1 | gi|597785595|ref|XP_007256277.1| | PREDICTED: craniofacial development protein 1 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_824.1_14588.t1 | gi|348523543|ref|XP_003449283.1| | PREDICTED: craniofacial development protein 1-like [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_824.1_14588.t1 | gi|499006742|ref|XP_004556303.1| | PREDICTED: craniofacial development protein 1 [Maylandia zebra] | 0.0 |
| pfu_aug2.0_824.1_14588.t1 | gi|548464749|ref|XP_005747979.1| | PREDICTED: craniofacial development protein 1-like [Pundamilia nyererei] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_824.1_14588.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_824.1_14588.t1 atgtcagacgaggaagactacagttctggaagcgatgctgattacgttccatctgatggtgaagctgtgagtgaggaaga aaattctggtgatgaggaggacttggaggccctgcatgctgaggcaggaatagaggacagtggaggaggaaaggggaaaa aacgaaaaaaacgtggcaagtctgaagtacaagccaggaagagaaaaggagggattaagcttgatggagtggatggtgat attaacggtgatgaggagcaggagggtcataatgaggagttagcacaacaaatcaaggaggaggaaaaacaaaaacaaga ggagaaagacaaaaagagagcagatgacctgtggtcaagcttcttatctgatgtaggaacaagaccaaaacctaagctgt gtccatcacagccatcttcagcaccaagtcttaatgtgaataaacctactacgaccacaacacccagtacagcaccttct ggagctcctaacaaagtcactatcaccaaggagttcgactttgctggagaagttgtcaaggtcacaaaggatatagatgt cagttctaaagagggacagaaggagcttaaacgactggntttttgaggagccaagaagcctgtaggaggactcggaagtg tacttaataaaatcaacagaaaagaaaagatgagtacattagacaaatccaagttagactgggagacatttaaaacaaag gaggggatcagtgaagaacttcagattcataacagaggaaagcaaggatatatagagagaatgcagtttttgaacagaac agatcagagacaatttgagatagagagagatcttagactggggactagtagtagtaagagatga |
|
Protein
| Protein ID | pfu_aug2.0_824.1_14588.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_824.1_14588.t1 MSDEEDYSSGSDADYVPSDGEAVSEEENSGDEEDLEALHAEAGIEDSGGGKGKKRKKRGKSEVQARKRKGGIKLDGVDGD INGDEEQEGHNEELAQQIKEEEKQKQEEKDKKRADDLWSSFLSDVGTRPKPKLCPSQPSSAPSLNVNKPTTTTTPSTAPS GAPNKVTITKEFDFAGEVVKVTKDIDVSSKEGQKELKRLXFXGAKKPVGGLGSVLNKINRKEKMSTLDKSKLDWETFKTK EGISEELQIHNRGKQGYIERMQFLNRTDQRQFEIERDLRLGTSSSKR |
|