Gene
| Gene Model ID | pfu_aug2.0_824.1_14590 |
|---|---|
| Locus | scaffold824.1 : 153556 ... 179831 : + |
| To GenomeBrowser | scaffold824.1:153556..179831 |
| Genes list of scaffold | scaffold824.1 |
| Synonym | pfu_aug1.0_345.1_58088 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| peroxisomal acyl-coenzyme a oxidase 1-like isoform x2 | GO:0006631 GO:0016627 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_824.1_14590.t1 | 1 | 1 | Acyl-CoA_ox_N | 27 | 122 | 2.4e-20 | 73.0 | 1.6e-23 | 4.9e-20 | 72.0 |
| pfu_aug2.0_824.1_14590.t1 | 1 | 1 | Acyl-CoA_dh_M | 125 | 181 | 1.6e-06 | 27.5 | 1.1e-09 | 3.3e-06 | 26.5 |
| pfu_aug2.0_824.1_14590.t1 | 3 | 1 | ACOX | 341 | 371 | 1.6e-41 | 141.7 | 2.0 | 5900.0 | -3.6 |
| pfu_aug2.0_824.1_14590.t1 | 2 | 1 | Acyl-CoA_dh_1 | 362 | 416 | 1.1e-06 | 28.8 | 7.4e-05 | 0.22 | 11.6 |
| pfu_aug2.0_824.1_14590.t1 | 3 | 2 | ACOX | 453 | 483 | 1.6e-41 | 141.7 | 2.3 | 6800.0 | -3.8 |
| pfu_aug2.0_824.1_14590.t1 | 2 | 2 | Acyl-CoA_dh_1 | 475 | 536 | 1.1e-06 | 28.8 | 1.0e-05 | 0.031 | 14.3 |
| pfu_aug2.0_824.1_14590.t1 | 3 | 3 | ACOX | 573 | 742 | 1.6e-41 | 141.7 | 1.12104e-44 | 3.20001e-41 | 140.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_824.1_14590.t1 | gi|573895045|ref|XP_006635271.1| | PREDICTED: peroxisomal acyl-coenzyme A oxidase 1-like isoform X2 [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_824.1_14590.t1 | gi|554848508|ref|XP_005934551.1| | PREDICTED: peroxisomal acyl-coenzyme A oxidase 1-like isoform X2 [Haplochromis burtoni] | 0.0 |
| pfu_aug2.0_824.1_14590.t1 | gi|589269140|ref|NP_001277128.1| | acyl-CoA oxidase 1, palmitoyl [Oreochromis niloticus] | 0.0 |
| pfu_aug2.0_824.1_14590.t1 | gi|498928837|ref|XP_004539290.1| | PREDICTED: peroxisomal acyl-coenzyme A oxidase 1 isoform X2 [Maylandia zebra] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_824.1_14590.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_824.1_14590.t1 atggccttatatagccagagaatagcaggacttaaaaacaacatcccatacgagactcacaacatatcaatcagccctca gaagctgctgtttagtgatccattcttccaggaataccagaatgtgagagcttttggatctaggtcggaatactacgctg cctccgtaaagaaatcaacaaagatctttaaacttagaagacaacataagtggacagatgaagaatacgagactgtttta gatatatgccatgatgatctcgcccttactctacaccacaccatgtttattccggcgctggaacgcctggcgacagagga ccaaaaatcaaaatggctgacactggccaagcagtataaaatcatcggaacgtatgctcagacagagttggggcatggta catatctacaaggcttagaaactacagcaacttacgatccccagactcgagaatttgtcatgaacacacccacactgtct gcaatgaaatggtggccaggatcactgggtaaatccagtaaccatgccctggtacttgccacattaatcatcggtgggaa gaaatacgggatgcatcctttcttggtacagctacggagcatggacgatcataaagtactaccaggtataagagttggtg atataggagccaagatgggaggtaacagtgtagataatggctatctgataatggacaatgtaaggattccaagaaataac atgcttatgaaaaatgctcaggtaagcccagatggaaaatttgtaacccgtggtccaagcaaagcaaactatgctaccat gatgttgatacgagttcagatatgtaccatggcatatcaggtcgtgtcatctggagctactataggaatacgatattctg ctgtaagaagacagtcaaaacttgacccacaggaccgtgagcctaagatcctggagtaccagacacagcagtataagata tttcctggcctggccatgtcatatgcattcctcttcgcatccagaagtctgacaagaaaatatgaagaagcattcgctga aatccagagaggtgacttcaaaagtttgccagaactgcactgtttatcatctgggttgaagtctttctgttcagagcatt ctgttcgccaagtagagataatacgtcagtcgtgtggtggtcacggttatctgaatgctgccggccttgggatgttagtg aatgccgctgctccgatgataactgtagaaggggagaatactgtcatggaccgtgagcctaagatcctagagtaccagac ccagcagtataagatatttcctggcctggccatgtcatatgcattcctcttcacatcgagaagtctaacaagaaaatatg aagaagcattcgctgaaatccagagaggtgacttcaaaagtttgccagaactacactgtttatcatctgggttgaagtct ttctgttcagagcattctgttcgccaagtagagataatacgtcagtcgtgtggtggtcacggttatctgaatgctgcggg gctcgggatattagtgaatgcagctgctccgatgataactgtagaaggggagaatactgtcatgtatttacagcttgcca ggtacctattgaagagatttgccggtgccatgtcaggtcagcagttagacggcagtacatcatacctcagtatggatcca gctacatacgtctgtcctgtcatgtctgaaacagactgccgtaacctcacggcattatgtgatatatatagatacagatc ctatatgactgtatgtagagtggccagacaggtccagcgcgatatggagagtgacatgcctcagcatgtggcaatcaaca aaaacttggtcgatctggttagagctgctaaggctcacagttattacatagtagtgaaggactttgtggagggagtagaa gccctagtggcatcagctcctgtaatcaaggtcctcagaactctttgttgcttctatgctacccatggtatagccgaaca ttctggggacttcctagagtcagaagcaataggtctgcatcaactcaattggataaaaaacctacaggtgtctttgcttg gagagatcagaccagatgctgtagctttggtagatgcctttgactaccatgacatcacgctgtcctcggcattaggttgt tatgatggaaatgcttatgaacgactcttcaaatccacagagaatgatcctatgaataaagaagagttcgaaaaataa |
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Protein
| Protein ID | pfu_aug2.0_824.1_14590.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_824.1_14590.t1 MALYSQRIAGLKNNIPYETHNISISPQKLLFSDPFFQEYQNVRAFGSRSEYYAASVKKSTKIFKLRRQHKWTDEEYETVL DICHDDLALTLHHTMFIPALERLATEDQKSKWLTLAKQYKIIGTYAQTELGHGTYLQGLETTATYDPQTREFVMNTPTLS AMKWWPGSLGKSSNHALVLATLIIGGKKYGMHPFLVQLRSMDDHKVLPGIRVGDIGAKMGGNSVDNGYLIMDNVRIPRNN MLMKNAQVSPDGKFVTRGPSKANYATMMLIRVQICTMAYQVVSSGATIGIRYSAVRRQSKLDPQDREPKILEYQTQQYKI FPGLAMSYAFLFASRSLTRKYEEAFAEIQRGDFKSLPELHCLSSGLKSFCSEHSVRQVEIIRQSCGGHGYLNAAGLGMLV NAAAPMITVEGENTVMDREPKILEYQTQQYKIFPGLAMSYAFLFTSRSLTRKYEEAFAEIQRGDFKSLPELHCLSSGLKS FCSEHSVRQVEIIRQSCGGHGYLNAAGLGILVNAAAPMITVEGENTVMYLQLARYLLKRFAGAMSGQQLDGSTSYLSMDP ATYVCPVMSETDCRNLTALCDIYRYRSYMTVCRVARQVQRDMESDMPQHVAINKNLVDLVRAAKAHSYYIVVKDFVEGVE ALVASAPVIKVLRTLCCFYATHGIAEHSGDFLESEAIGLHQLNWIKNLQVSLLGEIRPDAVALVDAFDYHDITLSSALGC YDGNAYERLFKSTENDPMNKEEFEK |
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