Gene
| Gene Model ID | pfu_aug2.0_825.1_17862 |
|---|---|
| Locus | scaffold825.1 : 10775 ... 20995 : - |
| To GenomeBrowser | scaffold825.1:10775..20995 |
| Genes list of scaffold | scaffold825.1 |
| Synonym | pfu_aug1.0_7018.1_02365 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_825.1_17862.t1 | 2 | 1 | Fibrinogen_C | 161 | 225 | 1.4013e-45 | 156.3 | 5.8e-27 | 2.1e-23 | 83.1 |
| pfu_aug2.0_825.1_17862.t1 | 2 | 2 | Fibrinogen_C | 226 | 321 | 1.4013e-45 | 156.3 | 9.9e-26 | 3.7e-22 | 79.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_825.1_17862.t1 | gi|759148823|ref|XP_011368358.1| | PREDICTED: fibrinogen C domain-containing protein 1 [Pteropus vampyrus] | 2.0e-38 |
| pfu_aug2.0_825.1_17862.t1 | gi|586526578|ref|XP_006918229.1| | PREDICTED: fibrinogen C domain-containing protein 1 [Pteropus alecto] | 4.0e-37 |
| pfu_aug2.0_825.1_17862.t1 | gi|658922111|ref|XP_008400785.1| | PREDICTED: fibrinogen C domain-containing protein 1 [Poecilia reticulata] | 2.0e-36 |
| pfu_aug2.0_825.1_17862.t1 | gi|441623756|ref|XP_003276795.2| | 2.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_825.1_17862.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_825.1_17862.t1 atggagaattcccatctatttgtttttctcagcatacaatttctagtgatttctttaaaatttggccatcctttcgccga cgatgatgttgtatcttttaataatggcacttccacatgttcttgtgctgatgagaagatgataattgcgcgtcaagaat tagctctgaggaacctgagagacaaattagagaagttaacatttacaactgaaacactgtctgaaatccgaagcctcata ttagctttacgcggcgacatgaaatctgccgttttaaatacaaatcaaaaagttaaggttcttttcgatgaagttgatgc ttctgcactgataatggataccatgcaaaacgactttatgaacaccgtagaaagacttgaagataaagtggctaatttga cgagtgaaaacatggggagaaatgaatcagatcaatgtcggacggaggatctcagttcgaagaacatccatcgaatatat ggagagaggaaatcgggaccatatcgaatttacacctcaaagagtaccagttacaccgcgtactgcgacatggaaacaga cggcggtggatggactgtaattcagcgacgaatggatggcagtgttaactttaacagagtatggaatgactacaaacatg gttttggcagtgtaactggagaacattggctagctgaagggtataagctcaaagttggacgatactatggagatgcagga aactccctatcatcgcacaatggaatgaagtttacaacaaaagatgtcgatcaggataattctaagaaaggtaactgtgc agtatggtgggaaggaggttggtggtttaacgcttgtttggcctccaacctaaatggaatatacctttatgctaaaacca aatatcaatgggatggtataatatggagaacatggggacaaaataaatttcctttcaaagcttcaaccatgatgatcaga caagaatcattttaa |
|
Protein
| Protein ID | pfu_aug2.0_825.1_17862.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_825.1_17862.t1 MENSHLFVFLSIQFLVISLKFGHPFADDDVVSFNNGTSTCSCADEKMIIARQELALRNLRDKLEKLTFTTETLSEIRSLI LALRGDMKSAVLNTNQKVKVLFDEVDASALIMDTMQNDFMNTVERLEDKVANLTSENMGRNESDQCRTEDLSSKNIHRIY GERKSGPYRIYTSKSTSYTAYCDMETDGGGWTVIQRRMDGSVNFNRVWNDYKHGFGSVTGEHWLAEGYKLKVGRYYGDAG NSLSSHNGMKFTTKDVDQDNSKKGNCAVWWEGGWWFNACLASNLNGIYLYAKTKYQWDGIIWRTWGQNKFPFKASTMMIR QESF |
|