Gene
| Gene Model ID | pfu_aug2.0_825.1_17863 |
|---|---|
| Locus | scaffold825.1 : 47592 ... 64655 : - |
| To GenomeBrowser | scaffold825.1:47592..64655 |
| Genes list of scaffold | scaffold825.1 |
| Synonym | pfu_aug1.0_1412.1_44025 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| angiopoietin-4 isoform x3 | GO:0044707 GO:0044763 GO:0048518 GO:0050794 GO:0051239 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_825.1_17863.t1 | 1 | 1 | Fibrinogen_C | 42 | 221 | 5.4e-36 | 124.3 | 9.2e-40 | 6.8e-36 | 124.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_825.1_17863.t1 | gi|543716682|ref|XP_005499601.1| | PREDICTED: angiopoietin-4 isoform X1 [Columba livia] | 3.0e-30 |
| pfu_aug2.0_825.1_17863.t1 | gi|543716684|ref|XP_005499602.1| | PREDICTED: angiopoietin-4 isoform X2 [Columba livia] | 3.0e-30 |
| pfu_aug2.0_825.1_17863.t1 | gi|543263866|ref|XP_005422339.1| | PREDICTED: angiopoietin-4 [Geospiza fortis] | 5.0e-30 |
| pfu_aug2.0_825.1_17863.t1 | gi|543363244|ref|XP_005524990.1| | PREDICTED: angiopoietin-4 [Pseudopodoces humilis] | 9.0e-30 |
| pfu_aug2.0_825.1_17863.t1 | gi|543716686|ref|XP_005499603.1| | PREDICTED: angiopoietin-4 isoform X3 [Columba livia] | 1.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_825.1_17863.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_825.1_17863.t1 atgattaatactacttgtaatcttcagatcaatcacaattgttccacgaccatgtgtggacaggatggagtatgcacaga taccattaatagaggtacagtctgcttaaaagaacaatttgttgactgtgctgagctgaagcagcagggagctatggtgg atggattctacacaataacactacaggcaaatatctacagatatgcattctgtgatatgaccatacatgacggaggttgg actatcattctgcttcgaacaccttccatgaggctaactttccaacgaaactggtctgaatacaagaatggattctcaga ttccgtctctagagagtactggttgggtaacgatgtccttcatcttttaacgaaaaacaggcaatcagaggtatattttc acatccaagtccaaaacagcgcatggtattgggctaaatatacaaatttctatatactaagcgagagcaacaagtatcgg atctactttgatgcttcgtcatacacaggaactgcaggagagattcttacagccagttccggaaatgcaggagacattta cggtcaacgatttgctacttatgatgatgacgtatatacttgtgctgccacccttggcggaggatggtggaacagaggat gctcttattcatacttaacagcaacacagccaagctggtctggtctatctacgattacttttgctaaaatgatggtcagg gcctatgcgtaa |
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Protein
| Protein ID | pfu_aug2.0_825.1_17863.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_825.1_17863.t1 MINTTCNLQINHNCSTTMCGQDGVCTDTINRGTVCLKEQFVDCAELKQQGAMVDGFYTITLQANIYRYAFCDMTIHDGGW TIILLRTPSMRLTFQRNWSEYKNGFSDSVSREYWLGNDVLHLLTKNRQSEVYFHIQVQNSAWYWAKYTNFYILSESNKYR IYFDASSYTGTAGEILTASSGNAGDIYGQRFATYDDDVYTCAATLGGGWWNRGCSYSYLTATQPSWSGLSTITFAKMMVR AYA |
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