Gene
| Gene Model ID | pfu_aug2.0_825.1_17864 |
|---|---|
| Locus | scaffold825.1 : 75426 ... 102930 : + |
| To GenomeBrowser | scaffold825.1:75426..102930 |
| Genes list of scaffold | scaffold825.1 |
| Synonym | pfu_aug1.0_3979.1_37760 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_825.1_17864.t1 | 2 | 1 | I-set | 52 | 146 | 3.7e-09 | 36.2 | 5.7e-12 | 1.2e-08 | 34.6 |
| pfu_aug2.0_825.1_17864.t1 | 3 | 1 | V-set | 52 | 146 | 4.9e-08 | 32.8 | 9.1e-11 | 1.9e-07 | 30.9 |
| pfu_aug2.0_825.1_17864.t1 | 1 | 1 | Ig_2 | 53 | 146 | 3.7e-06 | 26.9 | 4.2e-09 | 8.8e-06 | 25.7 |
| pfu_aug2.0_825.1_17864.t1 | 4 | 1 | SRCR | 165 | 207 | 0.0 | 155.3 | 5.0e-11 | 1.1e-07 | 32.1 |
| pfu_aug2.0_825.1_17864.t1 | 3 | 2 | V-set | 167 | 183 | 4.9e-08 | 32.8 | 4.7 | 9900.0 | -3.6 |
| pfu_aug2.0_825.1_17864.t1 | 4 | 1 | SRCR_2 | 176 | 208 | 5.8e-09 | 36.0 | 0.0024 | 5.0 | 7.4 |
| pfu_aug2.0_825.1_17864.t1 | 4 | 2 | SRCR | 224 | 324 | 0.0 | 155.3 | 3.1e-17 | 6.5e-14 | 52.0 |
| pfu_aug2.0_825.1_17864.t1 | 4 | 2 | SRCR_2 | 237 | 263 | 5.8e-09 | 36.0 | 6.7e-05 | 0.14 | 12.3 |
| pfu_aug2.0_825.1_17864.t1 | 2 | 2 | I-set | 331 | 348 | 3.7e-09 | 36.2 | 2.1 | 4500.0 | -2.5 |
| pfu_aug2.0_825.1_17864.t1 | 3 | 3 | V-set | 341 | 356 | 4.9e-08 | 32.8 | 3.6 | 7700.0 | -3.3 |
| pfu_aug2.0_825.1_17864.t1 | 4 | 3 | SRCR | 344 | 438 | 0.0 | 155.3 | 7.2e-12 | 1.5e-08 | 34.8 |
| pfu_aug2.0_825.1_17864.t1 | 4 | 3 | SRCR_2 | 368 | 381 | 5.8e-09 | 36.0 | 0.61 | 1300.0 | -0.3 |
| pfu_aug2.0_825.1_17864.t1 | 4 | 4 | SRCR | 453 | 550 | 0.0 | 155.3 | 7.8e-13 | 1.6e-09 | 37.9 |
| pfu_aug2.0_825.1_17864.t1 | 4 | 4 | SRCR_2 | 468 | 496 | 5.8e-09 | 36.0 | 1.0e-05 | 0.022 | 14.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_825.1_17864.t1 | gi|390357803|ref|XP_001196387.2| | 4.0e-37 | |
| pfu_aug2.0_825.1_17864.t1 | gi|390340885|ref|XP_001184636.2| | 9.0e-36 | |
| pfu_aug2.0_825.1_17864.t1 | gi|390367876|ref|XP_788782.2| | 5.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_825.1_17864.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_825.1_17864.t1 atgtttcaatctttatggttatggatatgtttcatcttaacactaaattcacaacttccaaatggatacaagccgtatag actcccaggtgatccatatggatactacgatgacaaagagattttaacgccaatggtaaatgcatatggagggaaagtag gagaaagactgattctgagatgtagaatcaagacagaccaagctccggaaataaattggtataagaaggtttcggacaac accccctgtgttgtccgacacacacagatacggacaccagaaggattgttctgcttagatgatcgctccaggttccacat aaggaagaaaaagcatgtctctaaattagttatcaaaaatccaacactaaaggactctggattttacatgtgtgttgctt cattaagccggagaaacataacacaatctacaagagtaacttttcatgaattgtccacccttcctgtccgcttggttgat tctagaaaacacaatgttggcgaaggacgagtagaaatatattacaacaatacctggaacaaggttcacatatatacatg ggaaccccctgaagccagcctgatttgtaggctattgggttacaggtctcctaccgatacctctcacatttactctattg ttgttccagataagcaaattcgatttgctggaacatcactgttagagggcagaatagaagtgttcggtaatggatactgg ggcactgtctgtatgaacggactgactgacaatgaaatatcaaccatctgcaagacactaggattcagatatggaggcag tatgtacagtgcatgggatttgtattatgcagctcgtacagaagtaggaccaataatggtaactggtctaaaatgtcctc ctaacgccactgactatgggcaatgttctcacagtggcttcggcaatctttgttgtggatgtaaccacagttatgactta gctattaggtgtcacgaaagaccgattggagaggataatcagacattacgactatcaggatatgggagaaacgataaagg tcgtgttgagatctggcataatggaagttggatactcgtcgatccttactggctccagtttcctgaagctaacatgttct gcaaaatgctgggattcaggtctggtggcgaaatgtacaagagctacatctgtatagaaggtaattgtgacgtttcggaa tcattgtccggctacacagaatgtacgggtaaagaggataatctcgcacagtgtgaaggacttcaatggacaacgtactg gcccttatatggacgtccaaccggaatccgttgttatggagactatagaccatttgaagtgaagcagacattaaatcaga ctcacgagggagagatcaagttgaccaaagatggagaagattataggatatgtgctagactgtgggacgacattcatgct agggcagtctgcaaatcattgggctacagtgatggaagcgccaattatatcagggccacacggtatgtaagatacagtgg tgagaagatgataggttcaatgtactgtggacgcggagcagataacatgtatcaatgctttcattcagggtggaactctt acgataaggaatgcttcaatgcctttcctctcactgcggctgtacagtgtattttataa |
|
Protein
| Protein ID | pfu_aug2.0_825.1_17864.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_825.1_17864.t1 MFQSLWLWICFILTLNSQLPNGYKPYRLPGDPYGYYDDKEILTPMVNAYGGKVGERLILRCRIKTDQAPEINWYKKVSDN TPCVVRHTQIRTPEGLFCLDDRSRFHIRKKKHVSKLVIKNPTLKDSGFYMCVASLSRRNITQSTRVTFHELSTLPVRLVD SRKHNVGEGRVEIYYNNTWNKVHIYTWEPPEASLICRLLGYRSPTDTSHIYSIVVPDKQIRFAGTSLLEGRIEVFGNGYW GTVCMNGLTDNEISTICKTLGFRYGGSMYSAWDLYYAARTEVGPIMVTGLKCPPNATDYGQCSHSGFGNLCCGCNHSYDL AIRCHERPIGEDNQTLRLSGYGRNDKGRVEIWHNGSWILVDPYWLQFPEANMFCKMLGFRSGGEMYKSYICIEGNCDVSE SLSGYTECTGKEDNLAQCEGLQWTTYWPLYGRPTGIRCYGDYRPFEVKQTLNQTHEGEIKLTKDGEDYRICARLWDDIHA RAVCKSLGYSDGSANYIRATRYVRYSGEKMIGSMYCGRGADNMYQCFHSGWNSYDKECFNAFPLTAAVQCIL |
|