Gene
| Gene Model ID | pfu_aug2.0_825.1_17866 |
|---|---|
| Locus | scaffold825.1 : 143656 ... 164967 : + |
| To GenomeBrowser | scaffold825.1:143656..164967 |
| Genes list of scaffold | scaffold825.1 |
| Synonym | pfu_aug1.0_245.1_50747 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| homeobox protein aristaless-like | GO:0005634 GO:0006355 GO:0043565 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_825.1_17866.t1 | 1 | 1 | Homeobox | 148 | 204 | 2.0e-24 | 84.9 | 2.9e-28 | 4.3e-24 | 83.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_825.1_17866.t1 | gi|642923879|ref|XP_008193911.1| | PREDICTED: aristaless isoform X2 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_825.1_17866.t1 | gi|167234447|ref|NP_001107838.1| | aristaless [Tribolium castaneum] | 2.8026e-45 |
| pfu_aug2.0_825.1_17866.t1 | gi|642923877|ref|XP_008193910.1| | PREDICTED: aristaless isoform X1 [Tribolium castaneum] | 4.2039e-45 |
| pfu_aug2.0_825.1_17866.t1 | gi|645020974|ref|XP_008207398.1| | PREDICTED: homeobox protein aristaless-like [Nasonia vitripennis] | 1.00053e-42 |
| pfu_aug2.0_825.1_17866.t1 | gi|195032675|ref|XP_001988540.1| | GH11220 [Drosophila grimshawi] | 6.99949e-42 |
Transcript
| Transcript ID | pfu_aug2.0_825.1_17866.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_825.1_17866.t1 atggatctgtgtataaaaagacgttcatcttatgatattgacagtctgattggtcagggcaactcgtctcaaacatctct catagaaccgaataacacaaatggttcaagtgaaagaaccaggagtatgagaaaagaggcatctgaaactagggaagcga cgggcaatctccaaaacttcttaactctggaaaataaagaaatgaagaatgacataacgcatttatatggagctaatgat agcagccctaacgaggaagacaacccagatactagtactgataatacaccaacagatggagacactaaccagcttcagca taatgaaacctcccgttactcccctgctgtaacggtaaagccagacgacttccgtgcgtaccgaggagatttcggaagct atgacgagagagacgttgaggattatgggaagcggaagcagaggcgttatagaactaccttcacaagtttccagttggag gaactcgaacgggctttccagaaaactcactatccagatgtgtttatgagagaagagttggccatgagaatagacctgac ggaggcaagagtccaggtatggtttcaaaacaggagggccaagtggagaaagaaggaaaaagttggaccacaaggtcatc catacactccttacggagggaactttggtccaatgggtatgcagatcggacctagggcgctcgtccctacacatccaaat tatacagaaatccttctcaaggcctaccacaaccaactacaacaaagaaactgtaggctactagcgccaccagttcctag cgtatgtcccccacatccaatggtatcgcctgagttctacaacttggcaattcgtggaatgatgtatcctaacatttata aaatacctgcaaatccatcctctatgtcatatcaaaatcttttggcagaactaacaacaaaaaataaaatgacgttgact gactgcgcaccagtatatgaggattctatgaaaggcgcccatgaggtatcccctctggtatcactgcgcaacaaagtaca ggaacatgaactacaatatggggcagaagaacatccactggagtcaccacaatgctcatga |
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Protein
| Protein ID | pfu_aug2.0_825.1_17866.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_825.1_17866.t1 MDLCIKRRSSYDIDSLIGQGNSSQTSLIEPNNTNGSSERTRSMRKEASETREATGNLQNFLTLENKEMKNDITHLYGAND SSPNEEDNPDTSTDNTPTDGDTNQLQHNETSRYSPAVTVKPDDFRAYRGDFGSYDERDVEDYGKRKQRRYRTTFTSFQLE ELERAFQKTHYPDVFMREELAMRIDLTEARVQVWFQNRRAKWRKKEKVGPQGHPYTPYGGNFGPMGMQIGPRALVPTHPN YTEILLKAYHNQLQQRNCRLLAPPVPSVCPPHPMVSPEFYNLAIRGMMYPNIYKIPANPSSMSYQNLLAELTTKNKMTLT DCAPVYEDSMKGAHEVSPLVSLRNKVQEHELQYGAEEHPLESPQCS |
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