Gene
| Gene Model ID | pfu_aug2.0_8251.1_06332 |
|---|---|
| Locus | scaffold8251.1 : 1683 ... 7719 : + |
| To GenomeBrowser | scaffold8251.1:1683..7719 |
| Genes list of scaffold | scaffold8251.1 |
| Synonym | pfu_aug1.0_14142.1_61309 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_8251.1_06332.t1 | 4 | 1 | EF-hand_6 | 1 | 28 | 8.5e-26 | 87.4 | 5.4e-09 | 4.2e-06 | 26.1 |
| pfu_aug2.0_8251.1_06332.t1 | 4 | 1 | EF-hand_5 | 1 | 25 | 7.9e-24 | 81.8 | 6.9e-09 | 5.4e-06 | 25.5 |
| pfu_aug2.0_8251.1_06332.t1 | 4 | 1 | EF-hand_1 | 2 | 28 | 2.2e-32 | 107.8 | 7.1e-10 | 5.5e-07 | 28.4 |
| pfu_aug2.0_8251.1_06332.t1 | 2 | 1 | EF-hand_7 | 2 | 60 | 7.7e-32 | 109.2 | 2.2e-18 | 1.7e-15 | 56.8 |
| pfu_aug2.0_8251.1_06332.t1 | 3 | 1 | EF-hand_10 | 2 | 28 | 2.3e-07 | 30.3 | 0.00063 | 0.49 | 10.0 |
| pfu_aug2.0_8251.1_06332.t1 | 2 | 1 | EF-hand_like | 2 | 63 | 5.5e-06 | 26.3 | 4.7e-06 | 0.0036 | 17.2 |
| pfu_aug2.0_8251.1_06332.t1 | 4 | 1 | EF-hand_8 | 4 | 27 | 1.0e-21 | 76.3 | 8.4e-06 | 0.0066 | 16.0 |
| pfu_aug2.0_8251.1_06332.t1 | 2 | 1 | EF-hand_9 | 4 | 58 | 3.1e-10 | 39.8 | 6.0e-08 | 4.7e-05 | 23.2 |
| pfu_aug2.0_8251.1_06332.t1 | 2 | 1 | EF-hand_4 | 4 | 58 | 1.4e-06 | 27.9 | 0.01 | 7.9 | 6.2 |
| pfu_aug2.0_8251.1_06332.t1 | 2 | 1 | SPARC_Ca_bdg | 5 | 58 | 1.3e-10 | 41.2 | 6.1e-06 | 0.0048 | 16.9 |
| pfu_aug2.0_8251.1_06332.t1 | 3 | 2 | EF-hand_10 | 15 | 61 | 2.3e-07 | 30.3 | 6.1e-06 | 0.0047 | 16.5 |
| pfu_aug2.0_8251.1_06332.t1 | 4 | 2 | EF-hand_8 | 24 | 62 | 1.0e-21 | 76.3 | 4.7e-06 | 0.0037 | 16.8 |
| pfu_aug2.0_8251.1_06332.t1 | 2 | 2 | EF-hand_like | 36 | 117 | 5.5e-06 | 26.3 | 1.3e-05 | 0.01 | 15.8 |
| pfu_aug2.0_8251.1_06332.t1 | 4 | 2 | EF-hand_1 | 37 | 61 | 2.2e-32 | 107.8 | 8.7e-09 | 6.8e-06 | 25.0 |
| pfu_aug2.0_8251.1_06332.t1 | 4 | 2 | EF-hand_6 | 42 | 62 | 8.5e-26 | 87.4 | 7.0e-06 | 0.0055 | 16.4 |
| pfu_aug2.0_8251.1_06332.t1 | 4 | 2 | EF-hand_5 | 42 | 60 | 7.9e-24 | 81.8 | 0.0036 | 2.8 | 7.4 |
| pfu_aug2.0_8251.1_06332.t1 | 2 | 2 | SPARC_Ca_bdg | 71 | 133 | 1.3e-10 | 41.2 | 9.7e-08 | 7.6e-05 | 22.7 |
| pfu_aug2.0_8251.1_06332.t1 | 4 | 3 | EF-hand_8 | 73 | 101 | 1.0e-21 | 76.3 | 1.5e-05 | 0.012 | 15.2 |
| pfu_aug2.0_8251.1_06332.t1 | 4 | 3 | EF-hand_1 | 74 | 102 | 2.2e-32 | 107.8 | 6.6e-10 | 5.2e-07 | 28.5 |
| pfu_aug2.0_8251.1_06332.t1 | 4 | 3 | EF-hand_6 | 74 | 103 | 8.5e-26 | 87.4 | 8.3e-10 | 6.5e-07 | 28.7 |
| pfu_aug2.0_8251.1_06332.t1 | 2 | 2 | EF-hand_7 | 75 | 135 | 7.7e-32 | 109.2 | 7.8e-18 | 6.1e-15 | 55.1 |
| pfu_aug2.0_8251.1_06332.t1 | 4 | 3 | EF-hand_5 | 75 | 99 | 7.9e-24 | 81.8 | 6.2e-10 | 4.8e-07 | 28.8 |
| pfu_aug2.0_8251.1_06332.t1 | 2 | 2 | EF-hand_9 | 79 | 135 | 3.1e-10 | 39.8 | 1.9e-05 | 0.015 | 15.2 |
| pfu_aug2.0_8251.1_06332.t1 | 2 | 2 | EF-hand_4 | 79 | 135 | 1.4e-06 | 27.9 | 2.3e-07 | 0.00018 | 21.1 |
| pfu_aug2.0_8251.1_06332.t1 | 3 | 3 | EF-hand_10 | 89 | 133 | 2.3e-07 | 30.3 | 7.2e-05 | 0.056 | 13.1 |
| pfu_aug2.0_8251.1_06332.t1 | 4 | 4 | EF-hand_8 | 94 | 135 | 1.0e-21 | 76.3 | 7.3e-13 | 5.7e-10 | 38.6 |
| pfu_aug2.0_8251.1_06332.t1 | 4 | 4 | EF-hand_1 | 111 | 135 | 2.2e-32 | 107.8 | 8.2e-11 | 6.4e-08 | 31.3 |
| pfu_aug2.0_8251.1_06332.t1 | 4 | 4 | EF-hand_5 | 115 | 135 | 7.9e-24 | 81.8 | 2.8e-08 | 2.2e-05 | 23.5 |
| pfu_aug2.0_8251.1_06332.t1 | 4 | 4 | EF-hand_6 | 117 | 135 | 8.5e-26 | 87.4 | 2.7e-06 | 0.0021 | 17.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_8251.1_06332.t1 | gi|545704034|ref|XP_005704341.1| | calmodulin isoform 1 [Galdieria sulphuraria] | 4.0e-36 |
| pfu_aug2.0_8251.1_06332.t1 | gi|168005854|ref|XP_001755625.1| | predicted protein [Physcomitrella patens] | 2.0e-35 |
| pfu_aug2.0_8251.1_06332.t1 | gi|168011592|ref|XP_001758487.1| | predicted protein [Physcomitrella patens] | 3.0e-35 |
| pfu_aug2.0_8251.1_06332.t1 | gi|168015042|ref|XP_001760060.1| | predicted protein [Physcomitrella patens] | 3.0e-35 |
| pfu_aug2.0_8251.1_06332.t1 | gi|545366875|ref|XP_005648308.1| | EF-hand [Coccomyxa subellipsoidea C-169] | 6.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_8251.1_06332.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8251.1_06332.t1 atgagaaaaatttttgacaaaattgataccgatggaaacgggaaacttgatccaaacgagatacggacccttctacagtc cctgaatcaaaatcccacggaaagtgacgttcaacaacttatagagaattatgacaaaaatgggaatggcgtcatggaat ttgaggagtttgtagattttttggacggttataagaaagatccatgtacgataagaaacgaattaagggacgcttttaaa gttctagatcaaaacaaggatggtaaagtaagcgctcttgaattaaagacagtaatgacaatgttaggagagcagcttac agaggaccaggccaatgaaatgatatcacaagccgataaagacggagatggacaggtggattatgaagaatttgttaaac taatgtgtccagatgacgagcatgacagtgcccagaaagcggagtaa |
|
Protein
| Protein ID | pfu_aug2.0_8251.1_06332.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8251.1_06332.t1 MRKIFDKIDTDGNGKLDPNEIRTLLQSLNQNPTESDVQQLIENYDKNGNGVMEFEEFVDFLDGYKKDPCTIRNELRDAFK VLDQNKDGKVSALELKTVMTMLGEQLTEDQANEMISQADKDGDGQVDYEEFVKLMCPDDEHDSAQKAE |
|