Gene
| Gene Model ID | pfu_aug2.0_8256.1_22869 |
|---|---|
| Locus | scaffold8256.1 : 7776 ... 10964 : + |
| To GenomeBrowser | scaffold8256.1:7776..10964 |
| Genes list of scaffold | scaffold8256.1 |
| Synonym | pfu_aug1.0_2379.1_22967 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_8256.1_22869.t1 | 2 | 1 | CLCA_N | 11 | 133 | 6.8e-33 | 114.0 | 4.3e-30 | 6.4e-26 | 91.1 |
| pfu_aug2.0_8256.1_22869.t1 | 2 | 2 | CLCA_N | 132 | 152 | 6.8e-33 | 114.0 | 1.8e-09 | 2.6e-05 | 23.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_8256.1_22869.t1 | gi|585714862|ref|XP_006812942.1| | PREDICTED: epithelial chloride channel protein-like [Saccoglossus kowalevskii] | 7.0e-28 |
| pfu_aug2.0_8256.1_22869.t1 | gi|395530612|ref|XP_003767383.1| | PREDICTED: LOW QUALITY PROTEIN: calcium-activated chloride channel regulator 1-like [Sarcophilus harrisii] | 9.0e-27 |
| pfu_aug2.0_8256.1_22869.t1 | gi|260786375|ref|XP_002588233.1| | hypothetical protein BRAFLDRAFT_124700 [Branchiostoma floridae] | 2.0e-25 |
| pfu_aug2.0_8256.1_22869.t1 | gi|585174926|ref|XP_006739286.1| | PREDICTED: calcium-activated chloride channel regulator 1 [Leptonychotes weddellii] | 2.0e-25 |
| pfu_aug2.0_8256.1_22869.t1 | gi|544404677|ref|XP_005542881.1| | PREDICTED: calcium-activated chloride channel regulator 1 [Macaca fascicularis] | 4.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_8256.1_22869.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8256.1_22869.t1 atgaagatagtcagttctctggaaacgattttcctgttcttaacttggactctgtctgttactggcagacttcccaaaaa agtaatcaagatagacaacaacggataccaggatgtcacaataaccatctctcaaaatcttcctcaacaggataatgaaa atttagtacaaaacattacggatctattcacggcaacatcagagcagctattcaaagcaacaaagaatcatctgtacttc aaacatattactatagtagttcctcgtacatggactagtaaaccagactatcagatcgtgagtggtcctcagttcgatat ggcacatgtaattataggtgagaggaatccaagagttgggagtcgaccatatgttaccggggtaacgagctgtgataaat tccttgtccatcaatggggtcattatcgttggggattatttgatgagtatcctggaacggaatctccaaccttgaaacca gagaaaatattttatcttgctaatggtacagcaaaaccaaacgttcccgataatggttcaactgagatacataatgtgta cgctgatacgaagcagaacagatactgtcagggcaggagtaactgggctgtcatgagggaacatagcgacttcaaag |
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Protein
| Protein ID | pfu_aug2.0_8256.1_22869.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8256.1_22869.t1 MKIVSSLETIFLFLTWTLSVTGRLPKKVIKIDNNGYQDVTITISQNLPQQDNENLVQNITDLFTATSEQLFKATKNHLYF KHITIVVPRTWTSKPDYQIVSGPQFDMAHVIIGERNPRVGSRPYVTGVTSCDKFLVHQWGHYRWGLFDEYPGTESPTLKP EKIFYLANGTAKPNVPDNGSTEIHNVYADTKQNRYCQGRSNWAVMREHSDFK |
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