Gene
| Gene Model ID | pfu_aug2.0_829.1_31193 |
|---|---|
| Locus | scaffold829.1 : 37476 ... 53853 : + |
| To GenomeBrowser | scaffold829.1:37476..53853 |
| Genes list of scaffold | scaffold829.1 |
| Synonym | pfu_aug1.0_6342.1_09331 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_829.1_31193.t1 | 3 | 1 | Cu-binding_MopE | 416 | 429 | 8.2e-07 | 28.6 | 5.1e-06 | 0.019 | 14.7 |
| pfu_aug2.0_829.1_31193.t1 | 3 | 2 | Cu-binding_MopE | 436 | 449 | 8.2e-07 | 28.6 | 0.00016 | 0.61 | 9.9 |
| pfu_aug2.0_829.1_31193.t1 | 3 | 3 | Cu-binding_MopE | 784 | 797 | 8.2e-07 | 28.6 | 4.3e-06 | 0.016 | 14.9 |
Transcript
| Transcript ID | pfu_aug2.0_829.1_31193.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_829.1_31193.t1 atgacgttgtctacattggtccctttgttttcgctgatttgtacctgctttggagcacttgataacagaggtgatgaatt catcatcggattcatggacaacaaaattctccaaaacaatgacttggaaccagaaatcttcataaccactaacgaaaatg taacggtaacagtccatatcacggcaccaaaagctcaaggtttacacctggatcagactttcacactgacaagaggtgat gtaaagcaaattaaggtaccacaagccttacgtcaccacgaaactgagcttacttccaaggggatccttatccagtccga ccatgaaattgtggtgtacggcatcaacaaggaggtttactctgatgacggctatctggcgttgccgacagatgcgttag gtaagacgtattacacggcaaactacaagacctactattacgctgtattcctagttgtgggagtgcaggattctacacat gtgtccatccaactcacaaccgacaaccctgtcaatgtcacatttaaaggaaaacattacaaagggggagactggataaa tgttaccatgaacagattggattccctggagatccattcagttggagatctgacaggcaccaaaatagtcggtgataagc cattgtcagtcctcagtggaaacaaaaaggctgtagtagaggacggattgggaggtaactccagagatcatctagtagaa cacctcctgcctgtacagtcatgggggaagaactttgccacagtaccaattcccggacgaaccacaggagacatattcag attcattgccagtgagggaacaacagtcatgcagtattctatgacacaggcacctaaccatgagtctggagatccagcca tgattactatcccacctatagaacaatatgcctccaactattacttcacaacacctaagtattctcttggacactacacc aactactttatgttcatagtcgacgctgctcagaaaaatggactacgcttggacaataaaccattaccaaagaatgttgt ttatcacaatatcccaggaaccaatctgacagcaggttatgttgaaatcactgaaggaacgcactcagtctttcatacca atcctaaagttctcattggtggattactgtttggtagagcaaatcttgaaacctatggatttcctatcgggttgctcctc acaccaatcaactctaactgtttggccaagtcgatgacaccaggtgacgaggtagacaatgactgtgacggcactattga tgaggaaagatgtgatggaaaaggtgacgaggtagacaatgactgtgacggcactattgatgaggaaagatgtgatggaa aagctgcactggacaacagaggcaatgaattcatcattggttttatggagaacaaggtgacaaagaatgatttccaaccg gagatatttattactaccaatgaaaacgtgtctgtcaatgtgcacatcactgcaccaaaagccaaaggtgtcaatttaga tgtacgttttgtcataagacgtggcgaggtcaagcagatcaaggttccgactgcccttcgccatgtcatgacagagaaaa gttctaaagggatactcattcaggctgaccatgaaatagttgtgtacggaatcaacaaagaggtccactcagatgatggg tacctggccttacccacggatgccctcggtaccacatattacacagctaattataagacatactattatgcattgtttct cataataggagtgtccgattccaccaccgtctctatcactcttaccaatgataaccccgtcaatgtgacgtacaatggac ataagtaccacagcggatccacattcaatgttactctggatagacttgactccttacaaatacactccgtgggggacttg accggaacaaggataatagcagacaaacctatatcggttctgagcggaaacaaaaaggcgatagtagaagacggacttgg agggaattccagagatcacctagtagagcatttgttgccagttaaatcttggggtaagaattttgcgacagttccgattc caggaagaactaccggcgatttattcagattcattgctagtgaaggaaccacagtggttcgtgttagcggaaataaaggc tcagctccattcaacgatcgttttgtcatccctcaggcaggatcttacgtacagaaacactatgattctaatttgtacgc ccatatgactgcagataaaccaatacaagtaatgcaatattccatcacccaggctcctggtcatgaggctggcnttcaga attgtttggccaaatccatgacacctggtgatgaaatagacaatgattgtgatggtacaatagacgaggaactgtgtgac ggcactggtatgtatattttgtttaaagttgttatatcataa |
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Protein
| Protein ID | pfu_aug2.0_829.1_31193.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_829.1_31193.t1 MTLSTLVPLFSLICTCFGALDNRGDEFIIGFMDNKILQNNDLEPEIFITTNENVTVTVHITAPKAQGLHLDQTFTLTRGD VKQIKVPQALRHHETELTSKGILIQSDHEIVVYGINKEVYSDDGYLALPTDALGKTYYTANYKTYYYAVFLVVGVQDSTH VSIQLTTDNPVNVTFKGKHYKGGDWINVTMNRLDSLEIHSVGDLTGTKIVGDKPLSVLSGNKKAVVEDGLGGNSRDHLVE HLLPVQSWGKNFATVPIPGRTTGDIFRFIASEGTTVMQYSMTQAPNHESGDPAMITIPPIEQYASNYYFTTPKYSLGHYT NYFMFIVDAAQKNGLRLDNKPLPKNVVYHNIPGTNLTAGYVEITEGTHSVFHTNPKVLIGGLLFGRANLETYGFPIGLLL TPINSNCLAKSMTPGDEVDNDCDGTIDEERCDGKGDEVDNDCDGTIDEERCDGKAALDNRGNEFIIGFMENKVTKNDFQP EIFITTNENVSVNVHITAPKAKGVNLDVRFVIRRGEVKQIKVPTALRHVMTEKSSKGILIQADHEIVVYGINKEVHSDDG YLALPTDALGTTYYTANYKTYYYALFLIIGVSDSTTVSITLTNDNPVNVTYNGHKYHSGSTFNVTLDRLDSLQIHSVGDL TGTRIIADKPISVLSGNKKAIVEDGLGGNSRDHLVEHLLPVKSWGKNFATVPIPGRTTGDLFRFIASEGTTVVRVSGNKG SAPFNDRFVIPQAGSYVQKHYDSNLYAHMTADKPIQVMQYSITQAPGHEAGXQNCLAKSMTPGDEIDNDCDGTIDEELCD GTGMYILFKVVIS |
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