Gene
| Gene Model ID | pfu_aug2.0_829.1_31197 |
|---|---|
| Locus | scaffold829.1 : 114646 ... 129093 : + |
| To GenomeBrowser | scaffold829.1:114646..129093 |
| Genes list of scaffold | scaffold829.1 |
| Synonym | pfu_aug1.0_183872.1_50071 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_829.1_31197.t1 | 1 | 1 | Synaptobrevin | 103 | 184 | 5.7e-21 | 73.9 | 1.8e-23 | 1.1e-20 | 73.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_829.1_31197.t1 | gi|221330126|ref|NP_001137633.1| | synaptobrevin, isoform C [Drosophila melanogaster] | 4.0e-10 |
| pfu_aug2.0_829.1_31197.t1 | gi|195582130|ref|XP_002080881.1| | GD25998 [Drosophila simulans] | 4.0e-10 |
| pfu_aug2.0_829.1_31197.t1 | gi|194857980|ref|XP_001969075.1| | GG25222 [Drosophila erecta] | 7.0e-10 |
| pfu_aug2.0_829.1_31197.t1 | gi|195475294|ref|XP_002089919.1| | Syb [Drosophila yakuba] | 4.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_829.1_31197.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_829.1_31197.t1 atgggtgtgaagaaacccacgaaagaagagagtgagatggataaattcccaaatacaagggtatgtgattcagagtctga agatgacgagcaaactgatctgatgaaaaagaaaaggttaagaaatgacagaaagggaaaagaaaagaaaaagaaaaaga agaagaaaataaggaaaaagaagattgaagaagaagaggaagttatacaaaacgaaccgttaaaacaagctagaagtatg gacgatcttcgcgacacaggagaattccctataaggaaagcaagaagtgtggacgatttactctcctccaaaagaagaag agtttcagagattaaacaaataatgtacgaaaacgctaaaaagataagggatagaaacggcaaacttgacgatctggtgg agaaaggaagcagactggaaatgtccgcagaagagttctttcaaaagacaaaagagattaagaagaaagcattttggaaa ttgtggaaattttggataattcttggtgtaattattggcgttgtagttgtagtcatcatcattgttgtcatagtcgtact gaccaatcagaactcagaaaaatatggaccggcggaaacgaggccacaattaaaaacagtgacactgccgcctccatag |
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Protein
| Protein ID | pfu_aug2.0_829.1_31197.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_829.1_31197.t1 MGVKKPTKEESEMDKFPNTRVCDSESEDDEQTDLMKKKRLRNDRKGKEKKKKKKKKIRKKKIEEEEEVIQNEPLKQARSM DDLRDTGEFPIRKARSVDDLLSSKRRRVSEIKQIMYENAKKIRDRNGKLDDLVEKGSRLEMSAEEFFQKTKEIKKKAFWK LWKFWIILGVIIGVVVVVIIIVVIVVLTNQNSEKYGPAETRPQLKTVTLPPP |
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