Gene
| Gene Model ID | pfu_aug2.0_829.1_31201 |
|---|---|
| Locus | scaffold829.1 : 171556 ... 212039 : - |
| To GenomeBrowser | scaffold829.1:171556..212039 |
| Genes list of scaffold | scaffold829.1 |
| Synonym | pfu_aug1.0_5106.1_38066 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_829.1_31201.t1 | 2 | 1 | Exostosin | 72 | 291 | 0.0 | 174.5 | 2.8e-29 | 1.4e-25 | 89.9 |
| pfu_aug2.0_829.1_31201.t1 | 2 | 2 | Exostosin | 344 | 419 | 0.0 | 174.5 | 6.1e-27 | 3.0e-23 | 82.3 |
| pfu_aug2.0_829.1_31201.t1 | 2 | 1 | Glyco_transf_64 | 451 | 568 | 0.0 | 329.0 | 2.8026e-45 | 1.40004e-41 | 142.3 |
| pfu_aug2.0_829.1_31201.t1 | 2 | 2 | Glyco_transf_64 | 569 | 718 | 0.0 | 329.0 | 0.0 | 0.0 | 191.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_829.1_31201.t1 | gi|597735516|ref|XP_007230034.1| | PREDICTED: exostosin-1-like [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_829.1_31201.t1 | gi|512823969|ref|XP_004880275.1| | 0.0 | |
| pfu_aug2.0_829.1_31201.t1 | gi|742218425|ref|XP_010898503.1| | PREDICTED: exostosin-1b [Esox lucius] | 0.0 |
| pfu_aug2.0_829.1_31201.t1 | gi|573874757|ref|XP_006625737.1| | PREDICTED: exostosin-1-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_829.1_31201.t1 | gi|676430508|ref|XP_009045949.1| | hypothetical protein LOTGIDRAFT_199269, partial [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_829.1_31201.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_829.1_31201.t1 atgaaaggaagcgtctacaaaacactacacaaaaaggatggcgagtttcctctgtctttccaaaaaagaggagtctttca tccctattttgacaatgaggaatatgattccgtcacggatatgcacccttcaccaaaacatagaagggagtcagcatcgg aattcaaacgacaaagatgtaggatggaaacttgtttcgatttctccaaatgtgaaaaggattttaaagtgtacgtgtac ccagtacaggagagggtttcggaaagctacagtaaaatcttggtgtcgatacaggactcgaaatattacacaaaaaatcc cgaggaagcttgcatttttatattgtccattgatacattagatagggatgttcttagtcaaaattttgccaaagatattc aatcaaaaattgatcgtttatctttatggaacaatggaaagaatcatttgatatttaatctctattctggtacgtggcca gattattctcctaacttggattttgacattggtgaagcaatgctagctaagtcaagcatatcagtgcataaatttcgccc tgggtttgacatctcatttcctcttattggaaaagatcaccctcataaagggggagagcgtggtcatctttatatatcta tgaacaatatccctcctctacgatattatctattggcatttaaaggaaaacggtatttaacaggcattgggtctgaaacg agaaattcactgtatcacattcacaatggagaggaaattgttttgttaacgacgtgtcgacatggaaaaagttggcagaa aaaagcaagggagttaaatgatacacgatgtgatgtagacaataaagagtatgatagcagtatgtgttcctctgttgtgc accagtatgttggccatggttgttcaccagtatgtggtcctctgttgtacaccagtatgtggtccattgttgtacaccag tatgtggtcctcagttgtacaccagtatgtgatcctctgttgtacaccagtttgtggtcctctgttgtacactagtatga ttacagaaaactgctgaccaacgccacattttgtctggtcccgagggggcggcgacttggatcattcagatttcttgagt ccctgcaggcggggtgtataccgttcttactgagtaatggatgggagctgccttttagtgaggtgatagattggactaag gtggcagtgtggggagatgagaggttactattccaggtgccctccattgtgaggtcattgtctcacccagaaatcctggc tttacgtcaacagacacagttcctatgggaagcctacttctcctccatggataaaattgtcctcactacattagagatat tggttgtatggcactgtgatgtggcgccccctcctgcttaccagtggcccgcagatttaggggttcccattctagtcaaa actaaaataatcaagtcagtaaatgccagattttacctgtacagcgagctagaaatggatgctgtctttaactttgatga ggatactttagttacgacagatgagattgattttgcattcagtgtctggcaagaattcccagaaagaatagttggttttg cagctcgaagtcacttttgggacgaatccaagaatatgtggagctacacatctaaatataccaacgaatactccatgata ctgactggtgcttctgtttatcacaatgtctggcaagaattccctgatagaatagttggttttgcggctcgaagtcactt ctgggacgaatccaagaatatgtggagctacacatctaaatataccaacgaatactccatgatactgactggtgcttctg tttatcacaaatattatcattatttatacactaactccatcttcaactccgccattcaagttgttgaacagacacagaac tgtgaagacattttgatgaattttcttgttagtcacgtcaccaaactcccaccgattaaagtcacacatcgaaaaatcta cagagaatctatgcaggttagcatcaacaggacgacggggatggcagacgctgtcaagttcagggagcggcagacctgta tgagtacattcgttaacttgttcggacacatgcctcttattagatctaaagctcgtatggaccctttactattcaaagat cccgtttcaaatcttcggaaaaagtacagacaaatagaggttatatga |
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Protein
| Protein ID | pfu_aug2.0_829.1_31201.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_829.1_31201.t1 MKGSVYKTLHKKDGEFPLSFQKRGVFHPYFDNEEYDSVTDMHPSPKHRRESASEFKRQRCRMETCFDFSKCEKDFKVYVY PVQERVSESYSKILVSIQDSKYYTKNPEEACIFILSIDTLDRDVLSQNFAKDIQSKIDRLSLWNNGKNHLIFNLYSGTWP DYSPNLDFDIGEAMLAKSSISVHKFRPGFDISFPLIGKDHPHKGGERGHLYISMNNIPPLRYYLLAFKGKRYLTGIGSET RNSLYHIHNGEEIVLLTTCRHGKSWQKKARELNDTRCDVDNKEYDSSMCSSVVHQYVGHGCSPVCGPLLYTSMWSIVVHQ YVVLSCTPVCDPLLYTSLWSSVVHXYDYRKLLTNATFCLVPRGRRLGSFRFLESLQAGCIPFLLSNGWELPFSEVIDWTK VAVWGDERLLFQVPSIVRSLSHPEILALRQQTQFLWEAYFSSMDKIVLTTLEILVVWHCDVAPPPAYQWPADLGVPILVK TKIIKSVNARFYLYSELEMDAVFNFDEDTLVTTDEIDFAFSVWQEFPERIVGFAARSHFWDESKNMWSYTSKYTNEYSMI LTGASVYHNVWQEFPDRIVGFAARSHFWDESKNMWSYTSKYTNEYSMILTGASVYHKYYHYLYTNSIFNSAIQVVEQTQN CEDILMNFLVSHVTKLPPIKVTHRKIYRESMQVSINRTTGMADAVKFRERQTCMSTFVNLFGHMPLIRSKARMDPLLFKD PVSNLRKKYRQIEVI |
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