Gene
| Gene Model ID | pfu_aug2.0_829.1_31202 |
|---|---|
| Locus | scaffold829.1 : 212254 ... 226479 : - |
| To GenomeBrowser | scaffold829.1:212254..226479 |
| Genes list of scaffold | scaffold829.1 |
| Synonym | pfu_aug1.0_5106.1_38065 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_829.1_31202.t2 | 1 | 1 | GTP_EFTU | 33 | 158 | 2.8e-07 | 30.1 | 1.7e-10 | 5.0e-07 | 29.3 |
| pfu_aug2.0_829.1_31202.t2 | 1 | 1 | Ras | 34 | 158 | 8.4e-28 | 96.7 | 3.8e-31 | 1.1e-27 | 96.3 |
| pfu_aug2.0_829.1_31202.t2 | 1 | 1 | Arf | 39 | 158 | 1.2e-11 | 44.1 | 6.6e-15 | 1.9e-11 | 43.4 |
| pfu_aug2.0_829.1_31202.t2 | 1 | 1 | Miro | 42 | 117 | 2.8e-10 | 40.7 | 1.6e-13 | 4.8e-10 | 39.9 |
| pfu_aug2.0_829.1_31202.t2 | 1 | 1 | DnaJ | 197 | 246 | 1.3e-11 | 44.0 | 7.6e-15 | 2.2e-11 | 43.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_829.1_31202.t2 | gi|291239660|ref|XP_002739741.1| | PREDICTED: dnaJ homolog subfamily C member 27-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_829.1_31202.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_829.1_31202.t1 atgacaggaatggataagaaatccaaaaaatctctgagaatcaaaataatcagcatgggaaatgcagaagtaggaaagag ctgtatcatcaaaagatattgtgagaaaagatttgttcacaagtacctgacaacgataggtattgactatggagttacca gagcacagagagtatcaataaaggatcgtgatgtgaaggtgaatatctttgatatggctggacatccaatattttatgag gtacgcaatgagttttacaaggacacacagggtgctatcttggtgtacgatgtcgcagatcgtcagagttttgaagccct cgatgcctggatgacagagatgcagaatgagatcggcaatcagtcagaaatggacaatgttgttgtgtgtgtttgtgcaa ataagtgtgacaagaagcgtactgtggatgaagcagaggggagagtttgggctgatgcacgaggatttcactattttgaa acttcagcccagacaggtgacggtgtcacagaaatgttccaggcactgtttgatggggttgtcacagcgtctgaaaatgg tggtaaaagggccccagtacaaacacagctagggtattccaaggatcagatagatgccatacaaaaactcaaaagtgcta agaatgattacgaacgacttggtctatacccaggggctacaaaagatgatgtcaataaagcgtacagaaaacttgcggtg ctacttcaccctgataaaagtgtggctccgggaagtgaggacgcattcaaacttctggtggcggccaggacagctttatt aaagcggtgtcaatag |
|
| Transcript ID | pfu_aug2.0_829.1_31202.t2 |
| Definition | - |
>pfu_aug2.0_829.1_31202.t2 atgatctttatagctgcagaaacagccaacgacacttggctatttggttggttaacgtttaatgtatctgattttgaatt ctactttatcaacatcatcagagcacagagagtatcaataaaggatcgtgatgtgaaggtgaatatctttgatatggctg gacatccaatattttatgaggtacgcaatgagttttacaaggacacacagggtgctatcttggtgtacgatgtcgcagat cgtcagagttttgaagccctcgatgcctggatgacagagatgcagaatgagatcggcaatcagtcagaaatggacaatgt tgttgtgtgtgtttgtgcaaataagtgtgacaagaagcgtactgtggatgaagcagaggggagagtttgggctgatgcac gaggatttcactattttgaaacttcagcccagacaggtgacggtgtcacagaaatgttccaggcactgtttgatggggtt gtcacagcgtctgaaaatggtggtaaaagggccccagtacaaacacagctagggtattccaaggatcagatagatgccat acaaaaactcaaaagtgctaagaatgattacgaacgacttggtctatacccaggggctacaaaagatgatgtcaataaag cgtacagaaaacttgcggtgctacttcaccctgataaaagtgtggctccgggaagtgaggacgcattcaaacttctggtg gcggccaggacagctttattaaagcggtgtcaatag |
|
Protein
| Protein ID | pfu_aug2.0_829.1_31202.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_829.1_31202.t1 MTGMDKKSKKSLRIKIISMGNAEVGKSCIIKRYCEKRFVHKYLTTIGIDYGVTRAQRVSIKDRDVKVNIFDMAGHPIFYE VRNEFYKDTQGAILVYDVADRQSFEALDAWMTEMQNEIGNQSEMDNVVVCVCANKCDKKRTVDEAEGRVWADARGFHYFE TSAQTGDGVTEMFQALFDGVVTASENGGKRAPVQTQLGYSKDQIDAIQKLKSAKNDYERLGLYPGATKDDVNKAYRKLAV LLHPDKSVAPGSEDAFKLLVAARTALLKRCQ |
|
| Protein ID | pfu_aug2.0_829.1_31202.t2 |
| Definition | - |
>pfu_aug2.0_829.1_31202.t2 MIFIAAETANDTWLFGWLTFNVSDFEFYFINIIRAQRVSIKDRDVKVNIFDMAGHPIFYEVRNEFYKDTQGAILVYDVAD RQSFEALDAWMTEMQNEIGNQSEMDNVVVCVCANKCDKKRTVDEAEGRVWADARGFHYFETSAQTGDGVTEMFQALFDGV VTASENGGKRAPVQTQLGYSKDQIDAIQKLKSAKNDYERLGLYPGATKDDVNKAYRKLAVLLHPDKSVAPGSEDAFKLLV AARTALLKRCQ |
|