Gene
| Gene Model ID | pfu_aug2.0_83.1_10232 |
|---|---|
| Locus | scaffold83.1 : 3079 ... 15655 : - |
| To GenomeBrowser | scaffold83.1:3079..15655 |
| Genes list of scaffold | scaffold83.1 |
| Synonym | pfu_aug1.0_20957.1_25906 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_83.1_10232.t1 | 1 | 1 | Cid2 | 17 | 146 | 4.8e-29 | 101.4 | 1.3e-32 | 6.2e-29 | 101.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_83.1_10232.t1 | gi|524894939|ref|XP_005103959.1| | PREDICTED: coiled-coil domain-containing protein 58-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_83.1_10232.t1 | gi|657742155|ref|XP_008306188.1| | PREDICTED: coiled-coil domain-containing protein 58 isoform X1 [Cynoglossus semilaevis] | 5.60519e-45 |
| pfu_aug2.0_83.1_10232.t1 | gi|528519697|ref|XP_005162736.1| | PREDICTED: coiled-coil domain-containing protein 58 isoform X1 [Danio rerio] | 7.00649e-45 |
| pfu_aug2.0_83.1_10232.t1 | gi|734599175|ref|XP_010751280.1| | PREDICTED: coiled-coil domain-containing protein 58 [Larimichthys crocea] | 9.80909e-45 |
| pfu_aug2.0_83.1_10232.t1 | gi|597770606|ref|XP_007249098.1| | PREDICTED: coiled-coil domain-containing protein 58 isoform X1 [Astyanax mexicanus] | 1.96182e-44 |
Transcript
| Transcript ID | pfu_aug2.0_83.1_10232.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_83.1_10232.t1 atggctgcgcccactggaaggcatgaatttgagctttgcacagaattatgcgatgatttcataggatttcaggaacaatt gaagaagaagcgtaccattgatgatagagttattaatgttttgaatgataccgtccccttgaaatccttcagtgcccaga acaaccatgccaaacagtgtgaggaactgtatagtcagcttgttaaagcatataattctagagaccaatcaataagatac tgtatcaatacaatctcccagacagtacaaagtttacgagaaaaaaaagtggcaacacccgatgactttgaagttatgaa agccctcaggaaggaacaaacaaagttgagattaatgcaaggagaacttagtgtagaagaaataatcagggatagaacat taaaggctttccatgaacggtgtagggaacattacaggccaccaaacgtaccaaaggtctga |
|
Protein
| Protein ID | pfu_aug2.0_83.1_10232.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_83.1_10232.t1 MAAPTGRHEFELCTELCDDFIGFQEQLKKKRTIDDRVINVLNDTVPLKSFSAQNNHAKQCEELYSQLVKAYNSRDQSIRY CINTISQTVQSLREKKVATPDDFEVMKALRKEQTKLRLMQGELSVEEIIRDRTLKAFHERCREHYRPPNVPKV |
|