Gene
| Gene Model ID | pfu_aug2.0_83.1_10236 |
|---|---|
| Locus | scaffold83.1 : 90826 ... 98380 : + |
| To GenomeBrowser | scaffold83.1:90826..98380 |
| Genes list of scaffold | scaffold83.1 |
| Synonym | pfu_aug1.0_3598.1_16135 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lipase member h isoform x2 | GO:0004620 GO:0005615 GO:0005886 GO:0008201 GO:0016042 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_83.1_10236.t1 | 2 | 1 | Lipase | 2 | 76 | 7.70714e-44 | 150.2 | 5.6e-22 | 2.1e-18 | 66.6 |
| pfu_aug2.0_83.1_10236.t1 | 2 | 2 | Lipase | 76 | 175 | 7.70714e-44 | 150.2 | 1.2e-28 | 4.6e-25 | 88.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_83.1_10236.t1 | gi|260789982|ref|XP_002590023.1| | hypothetical protein BRAFLDRAFT_224784 [Branchiostoma floridae] | 2.0e-35 |
| pfu_aug2.0_83.1_10236.t1 | gi|115623573|ref|XP_793960.2| | 1.0e-34 | |
| pfu_aug2.0_83.1_10236.t1 | gi|741871638|ref|XP_010820919.1| | PREDICTED: lipase member H isoform X2 [Bos taurus] | 3.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_83.1_10236.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_83.1_10236.t1 atgaatgtaatagccgtggattggtcacaaggtgcagattctatcaactactacatatcatctgcaaataccagagtagt tggcgccttaatggctcggatgatgtcgcttcttaacgaggaaacccagactagttatggagatatgcatatagtgggtc acagtctcggtgctcatataggaggatatgccggtgcacaaacacccggtcttggtagaattacaggttttggctgcgac agaccattgggtgattctgatttctatcctaacggaggaatggaccaacccggttgtccggcaaacgtagggaccactct cttcgaacttgtttcaggcaaaatgtctgactttgatgttgcttgcagccatttgagagtcctggccctatttaccgagt caattacgtcatcatgtaaattccaggctgtaccatgcgacagcaaatccaagtttgataacaatgaatgtattcaatgt ggcgatggttgtgctgatatgggaaaggtggtgtcggacttgtctacacagatacagttactcgttatgaatccatag |
|
Protein
| Protein ID | pfu_aug2.0_83.1_10236.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_83.1_10236.t1 MNVIAVDWSQGADSINYYISSANTRVVGALMARMMSLLNEETQTSYGDMHIVGHSLGAHIGGYAGAQTPGLGRITGFGCD RPLGDSDFYPNGGMDQPGCPANVGTTLFELVSGKMSDFDVACSHLRVLALFTESITSSCKFQAVPCDSKSKFDNNECIQC GDGCADMGKVVSDLSTQIQLLVMNP |
|