Gene
| Gene Model ID | pfu_aug2.0_83.1_10242 |
|---|---|
| Locus | scaffold83.1 : 238558 ... 241700 : - |
| To GenomeBrowser | scaffold83.1:238558..241700 |
| Genes list of scaffold | scaffold83.1 |
| Synonym | pfu_aug1.0_8384.1_09753 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cystatin b | GO:0004866 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_83.1_10242.t1 | 1 | 1 | Cystatin | 4 | 75 | 1.2e-13 | 51.0 | 2.6e-17 | 1.3e-13 | 50.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_83.1_10242.t1 | gi|736197440|ref|XP_010773277.1| | PREDICTED: cystatin-B-like [Notothenia coriiceps] | 1.0e-34 |
| pfu_aug2.0_83.1_10242.t1 | gi|29124454|gb|AAH49040.1| | Zgc:56530 [Danio rerio] | 4.0e-34 |
| pfu_aug2.0_83.1_10242.t1 | gi|156739303|ref|NP_001096599.1| | cystatin B [Danio rerio] | 9.0e-34 |
| pfu_aug2.0_83.1_10242.t1 | gi|597770620|ref|XP_007249105.1| | PREDICTED: cystatin-B-like [Astyanax mexicanus] | 2.0e-33 |
| pfu_aug2.0_83.1_10242.t1 | gi|657742153|ref|XP_008306187.1| | PREDICTED: cystatin-B-like [Cynoglossus semilaevis] | 9.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_83.1_10242.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_83.1_10242.t1 atgatgtgcggaggaacttccgatgtcaaatcggctgacgaagaaattcagagtattgtaaatcaggtgaagaacgcagc agaagaaaaagcaggaaaaaaatttgatacatttgtagcagtgcaatataaatcacaggtggtggctggaacaaactatt ttgtcaaggtcaatgttggcgattcacacattcacctcagagtgttcaagcctctccctcatacaggcgcctcagcagag ttatcggatttacaaaaggggaaaactgtggatgatcctatagaatatttttag |
|
Protein
| Protein ID | pfu_aug2.0_83.1_10242.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_83.1_10242.t1 MMCGGTSDVKSADEEIQSIVNQVKNAAEEKAGKKFDTFVAVQYKSQVVAGTNYFVKVNVGDSHIHLRVFKPLPHTGASAE LSDLQKGKTVDDPIEYF |
|