Gene
| Gene Model ID | pfu_aug2.0_83.1_10247 |
|---|---|
| Locus | scaffold83.1 : 378388 ... 387565 : + |
| To GenomeBrowser | scaffold83.1:378388..387565 |
| Genes list of scaffold | scaffold83.1 |
| Synonym | pfu_aug1.0_5422.1_52533 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_83.1_10247.t1 | 1 | 1 | PIH1 | 23 | 306 | 0.0 | 256.2 | 0.0 | 0.0 | 254.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_83.1_10247.t1 | gi|676461668|ref|XP_009056017.1| | hypothetical protein LOTGIDRAFT_216148 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_83.1_10247.t1 | gi|524876152|ref|XP_005094795.1| | PREDICTED: PIH1 domain-containing protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_83.1_10247.t1 | gi|556980014|ref|XP_005996778.1| | PREDICTED: PIH1 domain-containing protein 1 isoform X1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_83.1_10247.t1 | gi|166157886|ref|NP_001107356.1| | PIH1 domain-containing protein 1 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_83.1_10247.t1 | gi|260789591|ref|XP_002589829.1| | hypothetical protein BRAFLDRAFT_287356 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_83.1_10247.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_83.1_10247.t1 atggagaacctactaggtggtaacacagaaactgatgaggcacaggctatactgaacaagcttatgctacagtccaacat aggggatgaagaaacacaaggagaaaaaccatgggtgcagataattccaagaccaggattttgtttgaagacaaagaaag agggtggagaaaaagttttcattaatgtctgccagtcagaaagtgttccacaagctaaggacatcacagaagaagaattg ttaaaacttcttgactcggatgaccctttcgggttccgagtgccgatgagtattggagaacctcatgcagaactcgataa aagtggacagggatgtacagcttatgatgtagtggtgcacccagactttatggagaagatgcagaacagtgaggtgttca gggcattcttcctttctgttactctggagggattagaagataaatataacacaacacttagtagggaatggttgatacta aagaacaggaagtgtgtgggaaatttacaagagcagaccattagaaaacaatccaaaccccaaatcatggaaatgggtga tgatggtaagatgtatccatcacagtccctgggaggtggtaagccattgattcaggaaatggatccaaacagacctctta caaaggaggagatcaaagcaagaggtgaagagccagagtataggattgtacaggaaccagctgagggtcatcctgaattc ctggtagctgaaatcagcttaccacaagtaaaagtgggaggtaccatgtctgtggacataggggaggacaggatactttt acaaaccagatccaacaaatattacttagatatatacctaccataccttctagtacaagatgactgtgcagcccagttca ataggaaaacaaggatattaactttgactttacctgttcagccagagggatga |
|
Protein
| Protein ID | pfu_aug2.0_83.1_10247.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_83.1_10247.t1 MENLLGGNTETDEAQAILNKLMLQSNIGDEETQGEKPWVQIIPRPGFCLKTKKEGGEKVFINVCQSESVPQAKDITEEEL LKLLDSDDPFGFRVPMSIGEPHAELDKSGQGCTAYDVVVHPDFMEKMQNSEVFRAFFLSVTLEGLEDKYNTTLSREWLIL KNRKCVGNLQEQTIRKQSKPQIMEMGDDGKMYPSQSLGGGKPLIQEMDPNRPLTKEEIKARGEEPEYRIVQEPAEGHPEF LVAEISLPQVKVGGTMSVDIGEDRILLQTRSNKYYLDIYLPYLLVQDDCAAQFNRKTRILTLTLPVQPEG |
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