Gene
| Gene Model ID | pfu_aug2.0_83.1_10248 |
|---|---|
| Locus | scaffold83.1 : 388515 ... 410217 : - |
| To GenomeBrowser | scaffold83.1:388515..410217 |
| Genes list of scaffold | scaffold83.1 |
| Synonym | pfu_aug1.0_5422.1_52532 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_83.1_10248.t1 | 4 | 1 | LRR_8 | 100 | 139 | 2.0e-09 | 37.0 | 0.0094 | 28.0 | 4.5 |
| pfu_aug2.0_83.1_10248.t1 | 7 | 1 | LRR_4 | 104 | 142 | 2.1e-09 | 36.7 | 0.0002 | 0.58 | 9.8 |
| pfu_aug2.0_83.1_10248.t1 | 7 | 2 | LRR_4 | 129 | 168 | 2.1e-09 | 36.7 | 4.7e-08 | 0.00014 | 21.3 |
| pfu_aug2.0_83.1_10248.t1 | 4 | 2 | LRR_8 | 151 | 208 | 2.0e-09 | 37.0 | 3.8e-11 | 1.1e-07 | 31.4 |
| pfu_aug2.0_83.1_10248.t1 | 7 | 3 | LRR_4 | 174 | 216 | 2.1e-09 | 36.7 | 1.7e-06 | 0.0051 | 16.3 |
| pfu_aug2.0_83.1_10248.t1 | 7 | 4 | LRR_4 | 258 | 299 | 2.1e-09 | 36.7 | 0.0021 | 6.1 | 6.5 |
| pfu_aug2.0_83.1_10248.t1 | 4 | 3 | LRR_8 | 259 | 270 | 2.0e-09 | 37.0 | 0.79 | 2400.0 | -1.7 |
| pfu_aug2.0_83.1_10248.t1 | 4 | 4 | LRR_8 | 409 | 451 | 2.0e-09 | 37.0 | 0.00052 | 1.5 | 8.6 |
| pfu_aug2.0_83.1_10248.t1 | 7 | 5 | LRR_4 | 410 | 418 | 2.1e-09 | 36.7 | 1.3 | 3800.0 | -2.4 |
| pfu_aug2.0_83.1_10248.t1 | 7 | 6 | LRR_4 | 431 | 443 | 2.1e-09 | 36.7 | 0.089 | 260.0 | 1.3 |
| pfu_aug2.0_83.1_10248.t1 | 7 | 7 | LRR_4 | 510 | 531 | 2.1e-09 | 36.7 | 0.72 | 2100.0 | -1.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_83.1_10248.t1 | gi|194907829|ref|XP_001981637.1| | GG11504 [Drosophila erecta] | 2.0e-12 |
| pfu_aug2.0_83.1_10248.t1 | gi|195390955|ref|XP_002054132.1| | toll [Drosophila virilis] | 9.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_83.1_10248.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_83.1_10248.t1 atgtcccgacgtcgtcatgaatatgatgtttttatctcattcgacgaacaaagagtagacatacgaaaatggattccgac agagagtgttatatacaaagaatatatcatgccaaactcatcaccacagaagattttgtattgtcctatggaacgatgcg actatgaagttattcataaacaaaaatgttgcctttgtgatggtttaacagattgggaatatcataatagttctcttggc gagctcaccattaaggtgaatccacagaatagttccagagcagaggttataaaccctacggaccaccaggaaaatttgta caaactccagtttaataaacatctacttacatcatttccagaaaagctatgtaactttaaagaacttgtgattatagaat taagaaacaacatgatttcacagattggagatatttcatgcttagatatattagatacgttagatctttctggaaatcaa atcagagatattaatgacctttcattcaaatacaaccttaatctcaggattttggacttgtctaacaatatgctggcgac catgagcccgagtattttacctccattagcgttgtcatctttatttttacagcataattacatcaggtattacgatgtat ctaacttaggcattatgatgagcagacctttctgtagaattgatattagttacaataaattaaacgaaaaagcgataaca aatgaacaaaatcttacctttggtaatatagaaccgggcggacaaggatccgttaactttcaacacaacagtctaaaaac ttttccagagttcatagaaaaaatggaacttaaaaatctatcggaggtaagcagactctgggactaccacatggatataa gaaataaccctataagatgtgactgcattcttgtgccaattatggaaatgatacggccattgctgaatgttgttcaagca ttcaaagttttcttggatattccttgtttcaatccgacacaattaaggggacgctctatttataacataacaaagacagg agactgggagaatatgacttgtccactttatgtcataaacgattgtcctcgtggttgtaaatgcttctataaattgagcg gaaaacgagtgaattttcttcgggaagagaagacggtcttcgtcaattgcacagggtcgggattaaatgagctaccacac gtattaccaaagggagatgaatacagcattgacttctctgggaataatatttcggtagttagaccaaggaactaccttgg attcactgtaatgttgaatttatcacagaacaggctgcacaaaattgattctagatgtgttaaacttatgcgtaagacaa atcaaatgcttcatgaaatagaaatgacagaatatcctttgggggaattcgagaaggcgtattgtagcacaaagttcagc gaaacacctcatgcatttttagcatgcctacgagttgacggagaaaaaaggctgcataatggtcaaaccaagctcgaact ttctgacatgtctcgatgttttatagagaaactcaagcctattgtgtcatacgaaaaaatgaaaatgctatacgccgtag aattcaacttcaatcacgtgaacgatgaagaagaaaatcttgatcagatcgagggaatgctgagcaagtacgactattgt gacacagaattgttaaaatggagaatttttttcgagcatgagagtgaactaccagccaggatttgtcggaacatggagac acatatccacgaaagagtaatatgggtcatctgccaaatcaaagatgaaagcacttcataccagaatgccatgtcattgg tcaaaggtggagaatttcaaatgaacatcttaacaaaattgctgacaaatctaaaagatcacttgaaaagttccctcact tctactgtttgggaacgtgatgtcgtaagagcactttcaagaaatttagcaaagctaatttattccaccatgttagatga aagcttgagcatccttctcggcatttgttccaatactatcattcagaaccatgacatctaccagattgagagttatataa gagattatcatcttcattctcatgaagtatctgctgtagttaagtctactatggaggaatacctaaagtcaaaagatttg aaagttgccttggaaagtacgatcaataagactagtctaagactgaaggaaaaacttccacactatcttcaagtaaaagc agcacgagtgaaggatgtcacaggcatctcaataactgatcaaaccctcaacgtgtacgtaacaagagaatgtttcagaa acgacgaaggtgaaaggattaagagaaagtttgaaaatgatgtgcaccaactacattatgcacaaatatctaaagttgtt gcacaagtaaaggcttttcattttgacttgtttagaataaaatctggatcacatataggatttccaaatcccaaaatgaa tccaggtgttcgatacaaacatggcacaataggtgtcattgccacggaggccaagagtgtgaattacgcagttacttgtt ctcatgtggccgatccaggaaggtggatgtatgacgctgttggaaatgaaatcggaaaggcaacaactgagttatctgtc aggccttgtgatggatcattcggtaatttccttgactttacagccatacacacagagcttccaacagatagcaggctgaa atcgttaactggagagcctgcaattgttcgggttttcgacggcgactttgaaacacttgaagggaaagagatgtttcttt atggtgcaacttctaacagtgtaaaaacagtaaagtacaaagcaaacatacgttttgatggagggaacaattccctatta tacaaaagatcaaaggacacagttccagagcagacgatggtaggaatggacatactagaggcagtctcacaggataaacc gattcctggtgacagtggttccttggtatgttatcaagataacaacacggtgtacgcagtgttcctatttgtaggaatta atactcatgatggtacatttatctgcagccgtttagctgaaggattcgacatattggcaatgcggggctgtacattagaa ctatgcgttggggcagcttacgatgaactctag |
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Protein
| Protein ID | pfu_aug2.0_83.1_10248.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_83.1_10248.t1 MSRRRHEYDVFISFDEQRVDIRKWIPTESVIYKEYIMPNSSPQKILYCPMERCDYEVIHKQKCCLCDGLTDWEYHNSSLG ELTIKVNPQNSSRAEVINPTDHQENLYKLQFNKHLLTSFPEKLCNFKELVIIELRNNMISQIGDISCLDILDTLDLSGNQ IRDINDLSFKYNLNLRILDLSNNMLATMSPSILPPLALSSLFLQHNYIRYYDVSNLGIMMSRPFCRIDISYNKLNEKAIT NEQNLTFGNIEPGGQGSVNFQHNSLKTFPEFIEKMELKNLSEVSRLWDYHMDIRNNPIRCDCILVPIMEMIRPLLNVVQA FKVFLDIPCFNPTQLRGRSIYNITKTGDWENMTCPLYVINDCPRGCKCFYKLSGKRVNFLREEKTVFVNCTGSGLNELPH VLPKGDEYSIDFSGNNISVVRPRNYLGFTVMLNLSQNRLHKIDSRCVKLMRKTNQMLHEIEMTEYPLGEFEKAYCSTKFS ETPHAFLACLRVDGEKRLHNGQTKLELSDMSRCFIEKLKPIVSYEKMKMLYAVEFNFNHVNDEEENLDQIEGMLSKYDYC DTELLKWRIFFEHESELPARICRNMETHIHERVIWVICQIKDESTSYQNAMSLVKGGEFQMNILTKLLTNLKDHLKSSLT STVWERDVVRALSRNLAKLIYSTMLDESLSILLGICSNTIIQNHDIYQIESYIRDYHLHSHEVSAVVKSTMEEYLKSKDL KVALESTINKTSLRLKEKLPHYLQVKAARVKDVTGISITDQTLNVYVTRECFRNDEGERIKRKFENDVHQLHYAQISKVV AQVKAFHFDLFRIKSGSHIGFPNPKMNPGVRYKHGTIGVIATEAKSVNYAVTCSHVADPGRWMYDAVGNEIGKATTELSV RPCDGSFGNFLDFTAIHTELPTDSRLKSLTGEPAIVRVFDGDFETLEGKEMFLYGATSNSVKTVKYKANIRFDGGNNSLL YKRSKDTVPEQTMVGMDILEAVSQDKPIPGDSGSLVCYQDNNTVYAVFLFVGINTHDGTFICSRLAEGFDILAMRGCTLE LCVGAAYDEL |
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