Gene
| Gene Model ID | pfu_aug2.0_83.1_10251 |
|---|---|
| Locus | scaffold83.1 : 484369 ... 494297 : - |
| To GenomeBrowser | scaffold83.1:484369..494297 |
| Genes list of scaffold | scaffold83.1 |
| Synonym | pfu_aug1.0_2210.1_30020 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_83.1_10251.t1 | 2 | 1 | Herpes_teg_N | 37 | 138 | 2.5e-07 | 30.3 | 8.5e-10 | 1.6e-06 | 27.6 |
| pfu_aug2.0_83.1_10251.t1 | 2 | 2 | Herpes_teg_N | 225 | 295 | 2.5e-07 | 30.3 | 0.41 | 750.0 | -0.6 |
| pfu_aug2.0_83.1_10251.t1 | 1 | 1 | Helitron_like_N | 548 | 607 | 5.8e-15 | 55.5 | 7.5e-18 | 1.4e-14 | 54.2 |
| pfu_aug2.0_83.1_10251.t1 | 1 | 1 | PIF1 | 1124 | 1346 | 4.4e-26 | 91.6 | 4.8e-29 | 8.9e-26 | 90.6 |
| pfu_aug2.0_83.1_10251.t1 | 1 | 1 | AAA_30 | 1125 | 1355 | 7.8e-08 | 32.1 | 2.3e-10 | 4.3e-07 | 29.7 |
Transcript
| Transcript ID | pfu_aug2.0_83.1_10251.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_83.1_10251.t1 atgagttgtgcaacttccagtatctttgttgatcataaggaggcagaaaaacaaataccagctataggtggaaatactaa agatgttgaaatatttgccattcaaggtgattctctttatagacaagctaaaataaaacttgggataacacaggattact tagagcccaccgaccttccgccttatatatctattcacaataagcatgttcattggaaaactgatgaaaccctttcaggt aatatagacgtcaatttttctaaccaatatccatttcttacactagaaactgcagtactaaatgccctgtcattgaaaaa tcaagctgtcatgatttgtaagggaatctgtgttggtcttgtaaagcaagggaatgacatatttatatttgattctcatg ccagaaataacaaaggccttgcttgtaacaatggaaaaagtgttttgttaagaacaacaaacattgagaatacatgtgcc cagcttcgtcaaatgtttggtcctacatgtgtaacaagctcagacttaaccctctgtggtcagtttgatttgcatccagt ttcattaagggaagtccaatcctccactatcagaagttgtcgtgtacatgtaactgtatcctctctagtcccttctgact atgttactcagcagtcggttagtattaggaaacaaagaacagacaattcagtattctcaattgtagatttaccgtttcta gcagaaactgaaaggtcaaagtcttctatcagtaagaaaagaaaatccaatggtaaatccatccaaccttcaaagatagt gaaaactaaacacactcagattatccaacactttcaaaatgaagtttcaaggggctcagaatatgtttgcaccagttgta atcagcttttctttaagcactctgttgtgtcatttgaaatcaataatataccccctcatttgcgagaaaaatgtacatta cttactaaaagcgtaggtggaatagaatggatttgcaaaaattgtctcctttgcttgaaacaaaacaaagttccaccttg ttcaattggtaatggaatgtgttttcctacccaaccagatgaattgaagggcttgactttcttagaagaacgaattgttt ctccaagaattccgtttatgcaactcagagaattgccgagagggggacaagttagtttgaaaggaaacattgtcaatgta ccggctgatgtgaacagcactgttaaagttttacccagaaacatgaatgaaactgaaacaataccactgaaatttaaaag aagtctaagctataaaagctgtatttcatttgaaaggattagaccagagaaagtaatagctgccgctaaatggttagtcg agaatagtagaatatttagaagcgagggcattacactaaatgaaaattggaacaatcaagtattaccaggggaacaatca aaagatataatgaatcaaggtagtttagattccctgtcctatgataagaatagaaatgatgaggaaagtgatactgagaa gagcttagatgattggacagaaaatgaaggtttgtcagagaggccaaatggaaacacagatacttttttaaacccatcag attttcgtgaatttaataggattttgagtgtagctcctggtgaaggaaacacaccattagctgatccggtttcttgtgca cgtaactttgaacatagagtgcagtgttttatttctcatgtattgaaacatccgttagcacctattggtaaagtaacaga cttcttttatcgggtggagttccaacagagaggttccccccacattcacatgttgttatggatagaaaatgcccctaaaa cttcatcgcattcttatgacgaaatatcttcattcatagacagtcatgtgacctgcaagaaggatgaaagcatggtcaat ttggtaaattatcaaacccacagacatgcctctacctgtcgtaagaaaggacaaccaatatgtcgctttggctttccact gcctcctattgacaagacaatgattttagatagcttaccaaaatcacacaaaaaatttgaagcttcggtaataaattgta acaaagttgcaacatttctagagtctatgaaattaggtgacaatattcaaatgtccttcgctcaatttctgacatctttg ggtttaagttatgaagaatatttgttagctattagatcagatattccacaaggaaaatcaaaagtgtttatgaatagact agtttctgaaatacgcattaataattacaacgaaacacttctccgaagttgggaggcaaatatggatattcagttcattt tggacccttacgcatgtgctacatacattgtctcatacatatcaaagggtcaaaggggtatgtcacagttgctaggtcaa gcctgtaaggaagcaaaaaaagatccagacattcggcagcaggtacgcacgattggaaacaaattcctttctcatgtaga gattggcagtcaagaagcagcctatattttactccaaatgccattaaggaggtcttcccgtgaagtagtttttatcaata ctttgccagaagaagaacgtgttgttcttgtaaaatcatttactgatctgaaaaatctacccccagattcaacatctatt gaagctgataataacatcaaacgctatcagcgaaggccaaagacaatggaaaactgctgtttggcagattatgttgcatt gtataatgtaaagtatacaaaaggaaaacctaaaaatgtttctagtaacattgatatggagttgcctgaagcagattatg cagaagacacatgtgatgatccttcgagtataacagacaatgatgatgaatttccagaagaacactttgctcgtgatgga gctattattgttaagaggagaaaggcaagatgcatatattcttgtggttacagcaaagaacttgatcctgaaaactatta tagggagttgattatgctttatttgccttggcgagatttaaataatcttaaaagcagctttccaacatacgaggatcagt atgacaaatttcaggaatctattgatgagaagaaaagagagtatgtttctgattgtgaaataaatatgtcattattaaga gaagacctggaggattctggtgaccctggtatagcaatatctgaaatgcaacaccaagaagaacaagatattcaaacagg gactcgaacttgcaaagaccttggctgttttgatccaaaagatggtgatcttgatacaagttatgacttgggacttgact taggtgtaggcagaaaacaaatattgcaacatgatgaacaattacagaatgaattgaatgatcgagactacaggtgcatg gtgcaaagtctgaatttgaaacaaaaagagtttttccatcatgtgttgcattggcacaaaactcgcacagagcctttatt caattttttaagtggaggtgctggagttggcaaaagtgttttacttaaagcattgtaccaatcattaattaaattttatt ctcatgaagttggtaataatcctgatgaattaaacgttttaatatgtgcacctactggtaaggctgcttatcaagtaggt ggtcttactattcattcagccttttgtataccagctgagcaaggccttgcatacaaaccattagacatgcaccagttaag ctcttttcagttgaagttcaagtctttaaaagttgttttcatagatgaaatatctatggttggtcgtaaaatgtttaatt ttataaacctacgccttcaggaaataatgggttgtctaaaaccttttggtggtgtctctgttattgcatttgaagatttg taccagttaaagcctgtgatggattcatggattttttcaaattgcaccagaacagatagtatagagatgcttgctacaaa tctttggactgaatatttcagtatttttgagttggatgaaatcatgagacaacgaaatgatctcaaatttgctcaattgt tgaatcgtttaagagaaggcattcaaacacaagaggatattgaaatattaaagcgtagatcgttatgccaaactgttgca gatacttcatgtatgccccacctgtatacgaccaggaaagaagtagcttatcataacctgtctttgtttgagaatgtagc ttcagaaaagaaaacaaccgtacaagctattgatgttgtttcaggcaactttcctgaacatttgaaacaatctttgatct caaggattcctgatgatccatcaaaaacaaaggcagccaaaactgtccacaaagctcaaggaagtacaatgaactttgct attgttcatttcggaaatcggaaaaatgaacatatgcattatgttgctttgagtcgagttacaaatatgtcgtctttgta tgttgatgaattggatgaaaacaagatatctgtatcaaattcagtccaggaggaaatgaatagactcagaatggataaac aaatgtctttggaagaagcccttaaaaatgccaaaggtgctccgtataggaaaccgataatcgctgttgtatgcggagtc tcagatccaataacatacaaaaaggaatctggtgaagaaaaacagttggttaccattggactagcggaccattcaacaat agtgaaatgcttgctttatgatatctcaaagctcaaagacatgaaggaaggaaacacagttttaatactcaattccataa caaaaacagctccacaaaaaactatagtcataacgcagcaaacgaaagtgatgaaaacgaaagaagttaaaatcaaagac gatgtcagaaaagcagcaatggagttagcctgtccaacagtaaaagaaatgtcattggcagatgttaagaaatcgccagt taaggttatgtgcaccactagagcacagatagcatctgctgaaatccctcgtgaggtcctcgtgaagggggttcagaccc aaataaaggaggtacaactgaaggaaggaaaagagagggtcaaactgactctctggagggacttctccaagattgatctg ccagttggaaactgggtacagttctccaatctcacaactcagtcctaccaagatgaaatttctctgtcaacaacctcacg gaccactataaaggccattactgcaccagaagaaaacattcagggaaacttaataggattcaccagaagtgatgaaaata tgttggaattggcccttgaaataagtggagattccccatcgtatctagtggaaaataaggttttggcagaagctcttaat tgtgacgagaaggatgtggaaaacgaacttgaagaaaatttgcccagaaaagtctgttccacaactcaaaatggtgaaat aagatcaattcaatttgaactttga |
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Protein
| Protein ID | pfu_aug2.0_83.1_10251.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_83.1_10251.t1 MSCATSSIFVDHKEAEKQIPAIGGNTKDVEIFAIQGDSLYRQAKIKLGITQDYLEPTDLPPYISIHNKHVHWKTDETLSG NIDVNFSNQYPFLTLETAVLNALSLKNQAVMICKGICVGLVKQGNDIFIFDSHARNNKGLACNNGKSVLLRTTNIENTCA QLRQMFGPTCVTSSDLTLCGQFDLHPVSLREVQSSTIRSCRVHVTVSSLVPSDYVTQQSVSIRKQRTDNSVFSIVDLPFL AETERSKSSISKKRKSNGKSIQPSKIVKTKHTQIIQHFQNEVSRGSEYVCTSCNQLFFKHSVVSFEINNIPPHLREKCTL LTKSVGGIEWICKNCLLCLKQNKVPPCSIGNGMCFPTQPDELKGLTFLEERIVSPRIPFMQLRELPRGGQVSLKGNIVNV PADVNSTVKVLPRNMNETETIPLKFKRSLSYKSCISFERIRPEKVIAAAKWLVENSRIFRSEGITLNENWNNQVLPGEQS KDIMNQGSLDSLSYDKNRNDEESDTEKSLDDWTENEGLSERPNGNTDTFLNPSDFREFNRILSVAPGEGNTPLADPVSCA RNFEHRVQCFISHVLKHPLAPIGKVTDFFYRVEFQQRGSPHIHMLLWIENAPKTSSHSYDEISSFIDSHVTCKKDESMVN LVNYQTHRHASTCRKKGQPICRFGFPLPPIDKTMILDSLPKSHKKFEASVINCNKVATFLESMKLGDNIQMSFAQFLTSL GLSYEEYLLAIRSDIPQGKSKVFMNRLVSEIRINNYNETLLRSWEANMDIQFILDPYACATYIVSYISKGQRGMSQLLGQ ACKEAKKDPDIRQQVRTIGNKFLSHVEIGSQEAAYILLQMPLRRSSREVVFINTLPEEERVVLVKSFTDLKNLPPDSTSI EADNNIKRYQRRPKTMENCCLADYVALYNVKYTKGKPKNVSSNIDMELPEADYAEDTCDDPSSITDNDDEFPEEHFARDG AIIVKRRKARCIYSCGYSKELDPENYYRELIMLYLPWRDLNNLKSSFPTYEDQYDKFQESIDEKKREYVSDCEINMSLLR EDLEDSGDPGIAISEMQHQEEQDIQTGTRTCKDLGCFDPKDGDLDTSYDLGLDLGVGRKQILQHDEQLQNELNDRDYRCM VQSLNLKQKEFFHHVLHWHKTRTEPLFNFLSGGAGVGKSVLLKALYQSLIKFYSHEVGNNPDELNVLICAPTGKAAYQVG GLTIHSAFCIPAEQGLAYKPLDMHQLSSFQLKFKSLKVVFIDEISMVGRKMFNFINLRLQEIMGCLKPFGGVSVIAFEDL YQLKPVMDSWIFSNCTRTDSIEMLATNLWTEYFSIFELDEIMRQRNDLKFAQLLNRLREGIQTQEDIEILKRRSLCQTVA DTSCMPHLYTTRKEVAYHNLSLFENVASEKKTTVQAIDVVSGNFPEHLKQSLISRIPDDPSKTKAAKTVHKAQGSTMNFA IVHFGNRKNEHMHYVALSRVTNMSSLYVDELDENKISVSNSVQEEMNRLRMDKQMSLEEALKNAKGAPYRKPIIAVVCGV SDPITYKKESGEEKQLVTIGLADHSTIVKCLLYDISKLKDMKEGNTVLILNSITKTAPQKTIVITQQTKVMKTKEVKIKD DVRKAAMELACPTVKEMSLADVKKSPVKVMCTTRAQIASAEIPREVLVKGVQTQIKEVQLKEGKERVKLTLWRDFSKIDL PVGNWVQFSNLTTQSYQDEISLSTTSRTTIKAITAPEENIQGNLIGFTRSDENMLELALEISGDSPSYLVENKVLAEALN CDEKDVENELEENLPRKVCSTTQNGEIRSIQFEL |
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