Gene
| Gene Model ID | pfu_aug2.0_8320.1_02965 |
|---|---|
| Locus | scaffold8320.1 : 3966 ... 10723 : + |
| To GenomeBrowser | scaffold8320.1:3966..10723 |
| Genes list of scaffold | scaffold8320.1 |
| Synonym | pfu_aug1.0_15170.1_39668 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mucosa-associated lymphoid tissue lymphoma translocation protein 1 | GO:0002684 GO:0007165 GO:0043170 GO:0044238 GO:0044424 GO:0046649 GO:0048584 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_8320.1_02965.t1 | 2 | 1 | Ig_3 | 20 | 92 | 1.1e-08 | 35.4 | 3.4e-07 | 0.00071 | 20.0 |
| pfu_aug2.0_8320.1_02965.t1 | 2 | 1 | I-set | 24 | 100 | 1.7e-09 | 37.4 | 6.1e-09 | 1.3e-05 | 24.9 |
| pfu_aug2.0_8320.1_02965.t1 | 2 | 1 | Ig_2 | 30 | 97 | 4.1e-12 | 46.0 | 5.5e-09 | 1.2e-05 | 25.3 |
| pfu_aug2.0_8320.1_02965.t1 | 2 | 2 | I-set | 152 | 195 | 1.7e-09 | 37.4 | 0.00027 | 0.58 | 10.0 |
| pfu_aug2.0_8320.1_02965.t1 | 2 | 2 | Ig_3 | 152 | 190 | 1.1e-08 | 35.4 | 2.8e-05 | 0.06 | 13.8 |
| pfu_aug2.0_8320.1_02965.t1 | 2 | 2 | Ig_2 | 155 | 199 | 4.1e-12 | 46.0 | 6.0e-07 | 0.0013 | 18.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_8320.1_02965.t1 | gi|260800211|ref|XP_002595028.1| | hypothetical protein BRAFLDRAFT_237417 [Branchiostoma floridae] | 1.0e-10 |
| pfu_aug2.0_8320.1_02965.t1 | gi|507541364|ref|XP_004654683.1| | PREDICTED: mucosa-associated lymphoid tissue lymphoma translocation protein 1 [Jaculus jaculus] | 1.0e-08 |
| pfu_aug2.0_8320.1_02965.t1 | gi|533115170|ref|XP_005373230.1| | PREDICTED: mucosa-associated lymphoid tissue lymphoma translocation protein 1 [Chinchilla lanigera] | 2.0e-08 |
| pfu_aug2.0_8320.1_02965.t1 | gi|560966965|ref|XP_006205867.1| | PREDICTED: mucosa-associated lymphoid tissue lymphoma translocation protein 1 [Vicugna pacos] | 2.0e-08 |
| pfu_aug2.0_8320.1_02965.t1 | gi|26337153|dbj|BAC32261.1| | unnamed protein product [Mus musculus] | 8.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_8320.1_02965.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8320.1_02965.t1 atgttaatttcaagccgccaccatattgttctccgtgtcaacaataagaaaatcaagattttatgtcagccagctgagac aacttacataaaggtgaatgacaaagtatgtttagaagtggaagcagtgggtttcccctatcctagataccagtggttta aattcagtgatatatcagagagttatacagagataaatggggcaaatctcagtgtatacaaagtagacaaggctaaagta agtgattcaggaacctattgctgtaggcttcacaatggtcagggagactcacaggtccacttcagtgaagaagctgtcgt aatagtggagaaaaatccagtaacaacagatgacagagctgtcaatcatgaccgtctacatcccatagacagatgtaaaa atcaaacagacttttaccgtcaacatgatattgatcccgagaaagcacgcctaccatacatccttgaacatcctcgctgc acacaactcacactcggcgacacactggttctgaactgtgtctctttaggacaagttcctttggtatatgaatggtacaa agacaggagaccatatggacagtcacatgactcatttataaag |
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Protein
| Protein ID | pfu_aug2.0_8320.1_02965.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8320.1_02965.t1 MLISSRHHIVLRVNNKKIKILCQPAETTYIKVNDKVCLEVEAVGFPYPRYQWFKFSDISESYTEINGANLSVYKVDKAKV SDSGTYCCRLHNGQGDSQVHFSEEAVVIVEKNPVTTDDRAVNHDRLHPIDRCKNQTDFYRQHDIDPEKARLPYILEHPRC TQLTLGDTLVLNCVSLGQVPLVYEWYKDRRPYGQSHDSFIK |
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