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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_8325.1_19626
Locus scaffold8325.1 : 1 ... 10701 : +
To GenomeBrowser scaffold8325.1:1..10701
Genes list of scaffold scaffold8325.1
Synonym pfu_aug1.0_15927.1_18284

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_8325.1_19626.t1 3 1 DUF2428 229 268 0.0 206.4 0.075 1100.0 -1.7
pfu_aug2.0_8325.1_19626.t1 3 2 DUF2428 421 625 0.0 206.4 0.0 1.49939e-43 148.7
pfu_aug2.0_8325.1_19626.t1 3 3 DUF2428 662 740 0.0 206.4 5.9e-19 8.7e-15 54.4

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_8325.1_19626.t1 gi|524898590|ref|XP_005105742.1| PREDICTED: thyroid adenoma-associated protein homolog [Aplysia californica] 0.0
pfu_aug2.0_8325.1_19626.t1 gi|676441113|ref|XP_009049392.1| hypothetical protein LOTGIDRAFT_112768, partial [Lottia gigantea] 0.0
pfu_aug2.0_8325.1_19626.t1 gi|390345332|ref|XP_797130.3| 0.0
pfu_aug2.0_8325.1_19626.t1 gi|578803077|ref|XP_006712131.1| PREDICTED: thyroid adenoma-associated protein isoform X8 [Homo sapiens] 0.0
pfu_aug2.0_8325.1_19626.t1 gi|675433976|ref|XP_008931206.1| PREDICTED: thyroid adenoma-associated protein [Manacus vitellinus] 0.0

Transcript
Transcript IDpfu_aug2.0_8325.1_19626.t1
Definition-
>pfu_aug2.0_8325.1_19626.t1
acccaaactattgaaggcagggaaagatgtgttagactacatgataaagcaactgtctgtgttcacatcttgtgaccaaa
gtaagcaactgggtgccctaataatgtgtttgaggagagccagggttttaggactgatgcagaaacaagaaccatcatct
gattctccagaatgtttgtttggagttgtcagtgtcactgtggtgcatcaggctctcagcagtgctgatgatcaggtaag
attggatgcatttgctcttctatgtgacaaccataaaacttctgaaccaatcagcttgctggaattcaaattaattcagc
acttcctgttatggaatctgaataaccaatcaccatccttcagacaacatttactgtcacacgtcaaaaagctttttcag
aggttcaaggaaagtgaaattgcagtattacgtaaaatgaaggttaaagataaacagcaggagtcatccactggtacact
acagtactatcaggacttccagacctggctgtttaacctcctccttcactgcctgtatcctggggcctcctttgccagga
ggagtacatgtctgtccattctgtcgctgatggtagacaccttctctcatgatcataatactggttttacattgaagaca
tattgggaaggaaaacatatacagacactgatggaatgtctaacagatacatttgaggataacaaaatggaagcatttaa
aattctcaagtcctgctttaacatgggcctagacctgcagagtcagactggaatgtgccttgaatctttgttgagagttt
ctatggatctagcaggcagcaccaagccacaggactgtacaacagcagcatatttgttcagatctctcctcttacagcca
aacatccatacattcctgtcaaactccgaccatttgatgtcagattacatccaggacactaccagaaatatcactaactc
tgttcaagagatttatgaaaaatctccaaatgcaagtgtagaaaaatttgaaaattatgctgaccaatcaaaaggctctt
tacagttgctatggatactgctgttttatttgagggaccaattgaatgttgccagtagcagattggctgtagcagctatt
actagacctatgtatccaaccttgcactgtattagatacattctctttgatgttaatttgaaaagttttatctttaaaaa
acatgaacctttcataaagaaaactacttacagaaagttacctccccctgaaatgaatttatgggaagttttcattgttg
aggtgctggatacttgtcttgagatttccagacttgtctcccctgtcgtacaaaactcctcaccagagggcaacctccca
caggaagttatagaaggtctaaatctgtctctaaaagaggaggcttctgacaaacctcataacagttccacaacaacctc
aacctccggaggtatagacagagtgatgttgatgccagagtatctcacagtgtgctgctggaggaatgtcaaggaggtgt
cactgttactagggcaactcactcaggatgcaccaatcacagacccccagcatgaaagtttgtctactgggttactaaat
gtggaacaagtaaagaccataggaggttacttcacaagacagctgttggattccatacatcgtggtgcctttgagttggc
atgtgcaggctttgtaaaacagtgtgatatgttatggaaaagtaatatcaaagaactaaaccaactgcctggtcaatggt
tagagtcagtaatgatggaagtgaagggtgatgatactaacaacagactgtgtgctactcgacgtagtgcaggattacca
ttctttattcagggcctcagtaccactaaaaaagaactccttatcttaactggtcagaaagccatccacttcaagtatga
tgtcatcatcggactgaaagtgggtgcgttgggaaaagatgaaagtctgatggagcaagatcagactttagtaagtacgg
agccagctagtacagggagaccatgtttcaagtccactatggatgtactgttagagttagtgcaaactgctgataagaaa
accatatcaaatgcaaaggtacatgctttgaatattttgagagcattgtatcgggacacaaggttaggggaggtggtaac
accctacatatcatttggtctacaggctgctgtccttggtttccaatcaccattttgggcagtgaggaattcagcaacat
tacttctcagtgcaatgataaccaggatatttggagtgaaaaggagcaaggatgaatctaacctttcaaagaaaaactg

Protein
Protein IDpfu_aug2.0_8325.1_19626.t1
Definition-
>pfu_aug2.0_8325.1_19626.t1
PKLLKAGKDVLDYMIKQLSVFTSCDQSKQLGALIMCLRRARVLGLMQKQEPSSDSPECLFGVVSVTVVHQALSSADDQVR
LDAFALLCDNHKTSEPISLLEFKLIQHFLLWNLNNQSPSFRQHLLSHVKKLFQRFKESEIAVLRKMKVKDKQQESSTGTL
QYYQDFQTWLFNLLLHCLYPGASFARRSTCLSILSLMVDTFSHDHNTGFTLKTYWEGKHIQTLMECLTDTFEDNKMEAFK
ILKSCFNMGLDLQSQTGMCLESLLRVSMDLAGSTKPQDCTTAAYLFRSLLLQPNIHTFLSNSDHLMSDYIQDTTRNITNS
VQEIYEKSPNASVEKFENYADQSKGSLQLLWILLFYLRDQLNVASSRLAVAAITRPMYPTLHCIRYILFDVNLKSFIFKK
HEPFIKKTTYRKLPPPEMNLWEVFIVEVLDTCLEISRLVSPVVQNSSPEGNLPQEVIEGLNLSLKEEASDKPHNSSTTTS
TSGGIDRVMLMPEYLTVCCWRNVKEVSLLLGQLTQDAPITDPQHESLSTGLLNVEQVKTIGGYFTRQLLDSIHRGAFELA
CAGFVKQCDMLWKSNIKELNQLPGQWLESVMMEVKGDDTNNRLCATRRSAGLPFFIQGLSTTKKELLILTGQKAIHFKYD
VIIGLKVGALGKDESLMEQDQTLVSTEPASTGRPCFKSTMDVLLELVQTADKKTISNAKVHALNILRALYRDTRLGEVVT
PYISFGLQAAVLGFQSPFWAVRNSATLLLSAMITRIFGVKRSKDESNLSKKN

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