Gene
| Gene Model ID | pfu_aug2.0_8325.1_19626 |
|---|---|
| Locus | scaffold8325.1 : 1 ... 10701 : + |
| To GenomeBrowser | scaffold8325.1:1..10701 |
| Genes list of scaffold | scaffold8325.1 |
| Synonym | pfu_aug1.0_15927.1_18284 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_8325.1_19626.t1 | 3 | 1 | DUF2428 | 229 | 268 | 0.0 | 206.4 | 0.075 | 1100.0 | -1.7 |
| pfu_aug2.0_8325.1_19626.t1 | 3 | 2 | DUF2428 | 421 | 625 | 0.0 | 206.4 | 0.0 | 1.49939e-43 | 148.7 |
| pfu_aug2.0_8325.1_19626.t1 | 3 | 3 | DUF2428 | 662 | 740 | 0.0 | 206.4 | 5.9e-19 | 8.7e-15 | 54.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_8325.1_19626.t1 | gi|524898590|ref|XP_005105742.1| | PREDICTED: thyroid adenoma-associated protein homolog [Aplysia californica] | 0.0 |
| pfu_aug2.0_8325.1_19626.t1 | gi|676441113|ref|XP_009049392.1| | hypothetical protein LOTGIDRAFT_112768, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_8325.1_19626.t1 | gi|390345332|ref|XP_797130.3| | 0.0 | |
| pfu_aug2.0_8325.1_19626.t1 | gi|578803077|ref|XP_006712131.1| | PREDICTED: thyroid adenoma-associated protein isoform X8 [Homo sapiens] | 0.0 |
| pfu_aug2.0_8325.1_19626.t1 | gi|675433976|ref|XP_008931206.1| | PREDICTED: thyroid adenoma-associated protein [Manacus vitellinus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_8325.1_19626.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8325.1_19626.t1 acccaaactattgaaggcagggaaagatgtgttagactacatgataaagcaactgtctgtgttcacatcttgtgaccaaa gtaagcaactgggtgccctaataatgtgtttgaggagagccagggttttaggactgatgcagaaacaagaaccatcatct gattctccagaatgtttgtttggagttgtcagtgtcactgtggtgcatcaggctctcagcagtgctgatgatcaggtaag attggatgcatttgctcttctatgtgacaaccataaaacttctgaaccaatcagcttgctggaattcaaattaattcagc acttcctgttatggaatctgaataaccaatcaccatccttcagacaacatttactgtcacacgtcaaaaagctttttcag aggttcaaggaaagtgaaattgcagtattacgtaaaatgaaggttaaagataaacagcaggagtcatccactggtacact acagtactatcaggacttccagacctggctgtttaacctcctccttcactgcctgtatcctggggcctcctttgccagga ggagtacatgtctgtccattctgtcgctgatggtagacaccttctctcatgatcataatactggttttacattgaagaca tattgggaaggaaaacatatacagacactgatggaatgtctaacagatacatttgaggataacaaaatggaagcatttaa aattctcaagtcctgctttaacatgggcctagacctgcagagtcagactggaatgtgccttgaatctttgttgagagttt ctatggatctagcaggcagcaccaagccacaggactgtacaacagcagcatatttgttcagatctctcctcttacagcca aacatccatacattcctgtcaaactccgaccatttgatgtcagattacatccaggacactaccagaaatatcactaactc tgttcaagagatttatgaaaaatctccaaatgcaagtgtagaaaaatttgaaaattatgctgaccaatcaaaaggctctt tacagttgctatggatactgctgttttatttgagggaccaattgaatgttgccagtagcagattggctgtagcagctatt actagacctatgtatccaaccttgcactgtattagatacattctctttgatgttaatttgaaaagttttatctttaaaaa acatgaacctttcataaagaaaactacttacagaaagttacctccccctgaaatgaatttatgggaagttttcattgttg aggtgctggatacttgtcttgagatttccagacttgtctcccctgtcgtacaaaactcctcaccagagggcaacctccca caggaagttatagaaggtctaaatctgtctctaaaagaggaggcttctgacaaacctcataacagttccacaacaacctc aacctccggaggtatagacagagtgatgttgatgccagagtatctcacagtgtgctgctggaggaatgtcaaggaggtgt cactgttactagggcaactcactcaggatgcaccaatcacagacccccagcatgaaagtttgtctactgggttactaaat gtggaacaagtaaagaccataggaggttacttcacaagacagctgttggattccatacatcgtggtgcctttgagttggc atgtgcaggctttgtaaaacagtgtgatatgttatggaaaagtaatatcaaagaactaaaccaactgcctggtcaatggt tagagtcagtaatgatggaagtgaagggtgatgatactaacaacagactgtgtgctactcgacgtagtgcaggattacca ttctttattcagggcctcagtaccactaaaaaagaactccttatcttaactggtcagaaagccatccacttcaagtatga tgtcatcatcggactgaaagtgggtgcgttgggaaaagatgaaagtctgatggagcaagatcagactttagtaagtacgg agccagctagtacagggagaccatgtttcaagtccactatggatgtactgttagagttagtgcaaactgctgataagaaa accatatcaaatgcaaaggtacatgctttgaatattttgagagcattgtatcgggacacaaggttaggggaggtggtaac accctacatatcatttggtctacaggctgctgtccttggtttccaatcaccattttgggcagtgaggaattcagcaacat tacttctcagtgcaatgataaccaggatatttggagtgaaaaggagcaaggatgaatctaacctttcaaagaaaaactg |
|
Protein
| Protein ID | pfu_aug2.0_8325.1_19626.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8325.1_19626.t1 PKLLKAGKDVLDYMIKQLSVFTSCDQSKQLGALIMCLRRARVLGLMQKQEPSSDSPECLFGVVSVTVVHQALSSADDQVR LDAFALLCDNHKTSEPISLLEFKLIQHFLLWNLNNQSPSFRQHLLSHVKKLFQRFKESEIAVLRKMKVKDKQQESSTGTL QYYQDFQTWLFNLLLHCLYPGASFARRSTCLSILSLMVDTFSHDHNTGFTLKTYWEGKHIQTLMECLTDTFEDNKMEAFK ILKSCFNMGLDLQSQTGMCLESLLRVSMDLAGSTKPQDCTTAAYLFRSLLLQPNIHTFLSNSDHLMSDYIQDTTRNITNS VQEIYEKSPNASVEKFENYADQSKGSLQLLWILLFYLRDQLNVASSRLAVAAITRPMYPTLHCIRYILFDVNLKSFIFKK HEPFIKKTTYRKLPPPEMNLWEVFIVEVLDTCLEISRLVSPVVQNSSPEGNLPQEVIEGLNLSLKEEASDKPHNSSTTTS TSGGIDRVMLMPEYLTVCCWRNVKEVSLLLGQLTQDAPITDPQHESLSTGLLNVEQVKTIGGYFTRQLLDSIHRGAFELA CAGFVKQCDMLWKSNIKELNQLPGQWLESVMMEVKGDDTNNRLCATRRSAGLPFFIQGLSTTKKELLILTGQKAIHFKYD VIIGLKVGALGKDESLMEQDQTLVSTEPASTGRPCFKSTMDVLLELVQTADKKTISNAKVHALNILRALYRDTRLGEVVT PYISFGLQAAVLGFQSPFWAVRNSATLLLSAMITRIFGVKRSKDESNLSKKN |
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