Gene
| Gene Model ID | pfu_aug2.0_834.1_14596 |
|---|---|
| Locus | scaffold834.1 : 180305 ... 188497 : - |
| To GenomeBrowser | scaffold834.1:180305..188497 |
| Genes list of scaffold | scaffold834.1 |
| Synonym | pfu_aug1.0_8927.1_02672 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| proteasome subunit alpha type-1 | GO:0004298 GO:0005634 GO:0005737 GO:0006511 GO:0019773 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_834.1_14596.t1 | 1 | 1 | Proteasome_A_N | 15 | 37 | 1.3e-12 | 46.8 | 3.3e-16 | 2.5e-12 | 45.8 |
| pfu_aug2.0_834.1_14596.t1 | 1 | 1 | Proteasome | 38 | 222 | 0.0 | 175.2 | 0.0 | 0.0 | 174.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_834.1_14596.t1 | gi|524885821|ref|XP_005099514.1| | PREDICTED: proteasome subunit alpha type-1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_834.1_14596.t1 | gi|524885819|ref|XP_005099513.1| | PREDICTED: proteasome subunit alpha type-1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_834.1_14596.t1 | gi|676461386|ref|XP_009055927.1| | hypothetical protein LOTGIDRAFT_232677 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_834.1_14596.t1 | gi|551511965|ref|XP_005807499.1| | PREDICTED: proteasome subunit alpha type-1-like isoform X2 [Xiphophorus maculatus] | 0.0 |
| pfu_aug2.0_834.1_14596.t1 | gi|675882258|ref|XP_009026631.1| | hypothetical protein HELRODRAFT_151021, partial [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_834.1_14596.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_834.1_14596.t1 atgcatacttttcatttattacatgtacagttcaggaaccagtatgacaatgatgttacagtgtggagtccacaggggag gatccatcagattgagtacgccatggaggcggtaaagcaaggatcggcaaccgtaggactcaaatcgaaaacacatgcaa ttctagtggctctaaagagagccccgtctgaactctcagcacatcaaaagaagataattcctatcgatgaccatataggt gtatctatagcaggattgacagctgatgctagattattaagtaactttatgagatctgagtgcctgaattcccgttacgc ctatgacagacctttacctgtgtcaaggcttgtaaccacagttgaatcccagattcccacccagaggtatggcaggcgac catttggtgttggcttattagtggcaggatatgacgagcaggggcctcacatctaccagacttgtccctcggctaattac tacgattgtaaggccatggcaattggtgcacgctcacagtcggcaagaacatacgtagaaaaattcctcgataaatttca agactgcaccttagaagaattgatcaagcatggattattagcactcagggatacactaccgcaggaagttgagcttacaa caaagaactgctccatgggaattgtgggtaaagaaatggatttcactatctacgatgatgaccagatgacagattactta aaacttattgagggtgaggagagatctagagcgcctgttcaagcccaagaagatcaggcggcaatggacacccagcaaga aggtgaagaccagcccccacccccagctgatcctcaggccgctgacccccaggctgaggagagaatggaccactga |
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Protein
| Protein ID | pfu_aug2.0_834.1_14596.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_834.1_14596.t1 MHTFHLLHVQFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAILVALKRAPSELSAHQKKIIPIDDHIG VSIAGLTADARLLSNFMRSECLNSRYAYDRPLPVSRLVTTVESQIPTQRYGRRPFGVGLLVAGYDEQGPHIYQTCPSANY YDCKAMAIGARSQSARTYVEKFLDKFQDCTLEELIKHGLLALRDTLPQEVELTTKNCSMGIVGKEMDFTIYDDDQMTDYL KLIEGEERSRAPVQAQEDQAAMDTQQEGEDQPPPPADPQAADPQAEERMDH |
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