Gene
| Gene Model ID | pfu_aug2.0_835.1_17869 |
|---|---|
| Locus | scaffold835.1 : 14522 ... 24865 : - |
| To GenomeBrowser | scaffold835.1:14522..24865 |
| Genes list of scaffold | scaffold835.1 |
| Synonym | pfu_aug1.0_24079.1_18983 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_835.1_17869.t1 | 3 | 1 | adh_short | 6 | 76 | 4.8e-17 | 62.3 | 4.1e-11 | 1.2e-07 | 31.7 |
| pfu_aug2.0_835.1_17869.t1 | 2 | 1 | adh_short_C2 | 14 | 79 | 5.2e-07 | 29.6 | 2.5e-08 | 7.5e-05 | 22.6 |
| pfu_aug2.0_835.1_17869.t1 | 3 | 2 | adh_short | 95 | 150 | 4.8e-17 | 62.3 | 4.6e-10 | 1.4e-06 | 28.3 |
| pfu_aug2.0_835.1_17869.t1 | 2 | 2 | adh_short_C2 | 104 | 179 | 5.2e-07 | 29.6 | 0.0049 | 14.0 | 5.3 |
| pfu_aug2.0_835.1_17869.t1 | 3 | 3 | adh_short | 183 | 197 | 4.8e-17 | 62.3 | 1.1 | 3300.0 | -2.2 |
Transcript
| Transcript ID | pfu_aug2.0_835.1_17869.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_835.1_17869.t1 atgaatatagcagggaaggtggccctaatcacagggtcggcacagggactgggaaaaagcttcgcagcagttttacttca aaagggagcacaggtgtgtttatcagatgtaaatccacacattttagagtccacctgcactgaactgagagagaaatacg gacaagacaaagtccactaccaagtatgtgatgtacgtgatgacgcacaaatagaagagttgaccttaaaaactactgtt ctacaccctaaatctgacgtcatttaccgtcttgaaaatggtgtaattcgaggctcccttcagggtataaagcatatgaa aaaagaaaatggtggcagcggtgggacaatagtcaacgtctcctcgctagctggtgtggttcctgtgagttattccccag cctatgccgccagcaaacacggagtcgttggttacactagatcctgggccgggcatcccgacatgaaaaccaatgatatc cgtttcctctgtctctgtccagcattcgcaaaaacggaaattctaaaaacaaaggaaggacaactcttggggcagaaaat ggcggaagaatttatgaaaaagacaggagtgatgagcgttgaccaagtgacccaggctttcacggatcttatagagacgc cggataatagcggaaccgtaatgtcggttacgttacaaggatctaaaccgctttttcaagtataa |
|
Protein
| Protein ID | pfu_aug2.0_835.1_17869.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_835.1_17869.t1 MNIAGKVALITGSAQGLGKSFAAVLLQKGAQVCLSDVNPHILESTCTELREKYGQDKVHYQVCDVRDDAQIEELTLKTTV LHPKSDVIYRLENGVIRGSLQGIKHMKKENGGSGGTIVNVSSLAGVVPVSYSPAYAASKHGVVGYTRSWAGHPDMKTNDI RFLCLCPAFAKTEILKTKEGQLLGQKMAEEFMKKTGVMSVDQVTQAFTDLIETPDNSGTVMSVTLQGSKPLFQV |
|