Gene
| Gene Model ID | pfu_aug2.0_835.1_17874 |
|---|---|
| Locus | scaffold835.1 : 132303 ... 156455 : - |
| To GenomeBrowser | scaffold835.1:132303..156455 |
| Genes list of scaffold | scaffold835.1 |
| Synonym | pfu_aug1.0_15653.1_18238 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_835.1_17874.t1 | 2 | 1 | Myotub-related | 14 | 62 | 0.0 | 191.7 | 7.7e-12 | 5.7e-08 | 31.9 |
| pfu_aug2.0_835.1_17874.t1 | 2 | 2 | Myotub-related | 99 | 277 | 0.0 | 191.7 | 0.0 | 0.0 | 156.8 |
| pfu_aug2.0_835.1_17874.t1 | 1 | 1 | 3-PAP | 373 | 432 | 3.3e-14 | 52.9 | 1.1e-17 | 8.2e-14 | 51.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_835.1_17874.t1 | gi|676439405|ref|XP_009048842.1| | hypothetical protein LOTGIDRAFT_112478, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_835.1_17874.t1 | gi|524908092|ref|XP_005109153.1| | PREDICTED: myotubularin-related protein 10-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_835.1_17874.t1 | gi|260799122|ref|XP_002594546.1| | hypothetical protein BRAFLDRAFT_130805 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_835.1_17874.t1 | gi|115647135|ref|XP_001199880.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_835.1_17874.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_835.1_17874.t1 atgtttttggatttaaattcagcccaaaggaacaaaataaaaagcttaccagaacgatttgttgttcccgggggaattct caataatgatttactcaatgcttcacatcagtacaatgaacggagactaccaacatggtgctacacacataagaatggag caagtttggtcaggaaagccgagctgtcattagactatgatgcctctgactatgaagcaaaatacatggctgccatacag ttagctgatgtagataaaggaacgccaattgtggtggatctgagtaaagaatgtccatccctcaaagacctacaacaaag tcatgaaaaactcaaagatttatgcttcatcgacacaaagaaggaatttgctatgcaggacatagcctggaattcatctg tagagagcacaaaatggctgttatatgtggcacagtgtttgagagtggctaaccaggtggctgatacactaagtaacaat cacactgtggtgttacaagaaccagatggacgtcatttctgctgtctgatatccagtttatctcagatcctcctggatcc gtctacacggatgcgacgtgggtttgaatgtctgattcagagagagtgggttgccatgggatatcctttccagagggaag gaggcctggtgttacagcaaggtccacaagatcagtgtccagtgttcctgttgtttttagactgtttatggcaattacta caacagtacccatcatgctttgcattttcggacacgtatctagtgacgctatgggacagtacttctacaggaatatttga aactttcttatttgacggttttcatcagaagtcccgctatcatcttgacggacgatgcatgaagcgattccgtctcccac cggtatggcgttgggaactacaatacacagaggaagatcagtccttctttaataatccactctacctcatggaaactaat aggcagctgaattcagcagtgaaatctgcaaacagaaatctcagttctgtgcattcccgtatgcctagagaggaacatta cgctctgtccttaggtgaaatgtacaggcagaggggagaagtaatatcagacaacaattccgcgtgtgggaggtcgtcaa gactacaacctttgacctgtgctcctgccatcaagttatggagtcagtgttacttacgatggcaagcaccggctcaaata gtagggggaggctacccatctcaatatctacaacagtgcgtaatggtggaggagattatctgtttacagcataaaacgga ctctttaacacggtccaagggagctaactccctgactcgaccaaagagtgacctgatatttagcttggccatagacacac caaattcttcagagttacttaattccactttcctgacctcatcattccctttctcattagatccttctacaagtgaccaa agaatggtgttcacgccaataaatgttttcctggagaatagtgcaatagattatgactatactggtgctgaagattag |
|
Protein
| Protein ID | pfu_aug2.0_835.1_17874.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_835.1_17874.t1 MFLDLNSAQRNKIKSLPERFVVPGGILNNDLLNASHQYNERRLPTWCYTHKNGASLVRKAELSLDYDASDYEAKYMAAIQ LADVDKGTPIVVDLSKECPSLKDLQQSHEKLKDLCFIDTKKEFAMQDIAWNSSVESTKWLLYVAQCLRVANQVADTLSNN HTVVLQEPDGRHFCCLISSLSQILLDPSTRMRRGFECLIQREWVAMGYPFQREGGLVLQQGPQDQCPVFLLFLDCLWQLL QQYPSCFAFSDTYLVTLWDSTSTGIFETFLFDGFHQKSRYHLDGRCMKRFRLPPVWRWELQYTEEDQSFFNNPLYLMETN RQLNSAVKSANRNLSSVHSRMPREEHYALSLGEMYRQRGEVISDNNSACGRSSRLQPLTCAPAIKLWSQCYLRWQAPAQI VGGGYPSQYLQQCVMVEEIICLQHKTDSLTRSKGANSLTRPKSDLIFSLAIDTPNSSELLNSTFLTSSFPFSLDPSTSDQ RMVFTPINVFLENSAIDYDYTGAED |
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