Gene
| Gene Model ID | pfu_aug2.0_835.1_17875 |
|---|---|
| Locus | scaffold835.1 : 161740 ... 164631 : + |
| To GenomeBrowser | scaffold835.1:161740..164631 |
| Genes list of scaffold | scaffold835.1 |
| Synonym | pfu_aug1.0_83295.1_56629 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| histone h1-delta-like | GO:0000786 GO:0003677 GO:0005634 GO:0006334 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_835.1_17875.t1 | 1 | 1 | Linker_histone | 39 | 113 | 6.0e-27 | 93.5 | 8.0e-31 | 1.2e-26 | 92.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_835.1_17875.t1 | gi|675864250|ref|XP_009017685.1| | hypothetical protein HELRODRAFT_144970, partial [Helobdella robusta] | 4.0e-30 |
| pfu_aug2.0_835.1_17875.t1 | gi|675864242|ref|XP_009017681.1| | hypothetical protein HELRODRAFT_144967, partial [Helobdella robusta] | 4.0e-30 |
| pfu_aug2.0_835.1_17875.t1 | gi|675888222|ref|XP_009029613.1| | hypothetical protein HELRODRAFT_89725 [Helobdella robusta] | 6.0e-30 |
| pfu_aug2.0_835.1_17875.t1 | gi|675872024|ref|XP_009021572.1| | hypothetical protein HELRODRAFT_195122 [Helobdella robusta] | 4.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_835.1_17875.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_835.1_17875.t1 atgtcagacgctgaagtagctgccccagctgaggctacgcccgtgaagaagggagcaaagacagcaaaaactgctactaa gaagaagtcaaagaacaagggcccaccaaaggatcatccaatgttcaaggatatgatcaaagatgccatcactgcgttga aggagagaggaggcagttcaagacaggcaattctgaaacacatcgttgcccactataacattaaagatcagaaagcagct aatgcacatctgaaaatggctctgcgtgcaggagtaaagaatggaaccctgaagcaggcaaaaggtactggagcttccgg ctcattcaagatgggagaagccaagaccaaatctcataaagccaaacctaaggcagagaaaaaggctgataaacccaaaa aggcagctgctcctaaaggagagaaaaaggcaaagaaagcaaagaaaccaaaaccagcaaaaagcaagccagcaaagaaa gtaaagacacccaaaaaggcagcagctaagaaacctaaaaaggcagctaaatctcccaaaaaggctaaaaaggcagctaa ggcctaa |
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Protein
| Protein ID | pfu_aug2.0_835.1_17875.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_835.1_17875.t1 MSDAEVAAPAEATPVKKGAKTAKTATKKKSKNKGPPKDHPMFKDMIKDAITALKERGGSSRQAILKHIVAHYNIKDQKAA NAHLKMALRAGVKNGTLKQAKGTGASGSFKMGEAKTKSHKAKPKAEKKADKPKKAAAPKGEKKAKKAKKPKPAKSKPAKK VKTPKKAAAKKPKKAAKSPKKAKKAAKA |
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