Gene
| Gene Model ID | pfu_aug2.0_835.1_17876 |
|---|---|
| Locus | scaffold835.1 : 167083 ... 190759 : - |
| To GenomeBrowser | scaffold835.1:167083..190759 |
| Genes list of scaffold | scaffold835.1 |
| Synonym | pfu_aug1.0_20314.1_18705 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glucosylceramidase-like | GO:0006665 GO:0016787 GO:0050789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_835.1_17876.t1 | 3 | 1 | Glyco_hydro_30 | 3 | 152 | 0.0 | 560.6 | 6.44597e-44 | 4.7e-40 | 137.2 |
| pfu_aug2.0_835.1_17876.t1 | 3 | 2 | Glyco_hydro_30 | 152 | 226 | 0.0 | 560.6 | 5.3e-28 | 3.9e-24 | 84.7 |
| pfu_aug2.0_835.1_17876.t1 | 3 | 3 | Glyco_hydro_30 | 229 | 486 | 0.0 | 560.6 | 0.0 | 0.0 | 342.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_835.1_17876.t1 | gi|676439402|ref|XP_009048841.1| | hypothetical protein LOTGIDRAFT_158016 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_835.1_17876.t1 | gi|260813850|ref|XP_002601629.1| | hypothetical protein BRAFLDRAFT_85797 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_835.1_17876.t1 | gi|524896691|ref|XP_005104817.1| | PREDICTED: glucosylceramidase-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_835.1_17876.t1 | gi|736241264|ref|XP_010784959.1| | PREDICTED: glucosylceramidase [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_835.1_17876.t1 | gi|198435580|ref|XP_002122773.1| | PREDICTED: glucosylceramidase-like [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_835.1_17876.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_835.1_17876.t1 atgcagagagattttggtgaagattccgtagcctgtgtgtgtaattccacgtactgcgatacagtagatgcaaacgtacg aggagatgagggacagtatagtttataccttacagattcagtaggagaccgtattgttcatacatatgggtctatcaact cacaaaacatgggtgctacaacctatactgtcaacaagaatgtaacgtaccaagaaataataggttttggcggagcattc acagatgccgctggtataaatatagggaaactttcactgggagcccagacaaatctgctcaagtcctactactctcctag cggtattgagtataatgttggtcgtattccgatggctagctgtgatttctccactcacccttattcgtacgatgactcta gcggtgattttaacctaacaaagtttgctcttacacaggaagatatcaactacaaggaatatgcaaaacacggcatcaag ttatgggggataacaggtcagaatgagcctacagatggaaacatattcaagtttccttttcaagctatgggctggacggc agagatgcagagagattttattgccaaggaccttggacctgcattagaacagaacgggctcagacacatcaagctgatga ttctagatgacagtagactaatgttgccatattggccggaaaaggaatatgcaaaacaaggcatcaagttatgggggata acaggtcagaatgagcctacagatggaaacatattcaagtttccttttcaagctatgggctggacggcagagatgcagag agattttattgccaaggaccttggacctgcattagaacagaacgggctcggacacatcaagctgatgattctagatgaca gtagactaatgttgccatattggccggaaaaggtatttgaaagcaaagatgccagtaagtacatatcaggtatagctgtc cattggtatcaagataaattcgttcctgcggcagtcttgtcaataacccacaaaaagtttccagataagtttattttagc gacagaggcgtgttctggagctgccggccccttagatcctgtcaaagtacgcctcggtaactgggagagggctgaagatt acgctcatgatataatgcaggatttacaaaattgggtcacaggatggacagattggaacatagccctagacatgcaggga gggcctaactgggtcaagaattttgtggacagtccagttattgtaaactctgataaagatgaattttacaaacagcctat gtattacatactaggtcacttcagcaagttcattgttcctggatctaagcgactagatctgactgtgaaggggagcaata agaacgtggaggtggtagcattcctacgtcctgactcatccattgtagctgttcttcttaataggtcagatgaagaagtt ttagtttccctccgagatctggacctaggttacataaacatcgatatgatacctcattgtatacagacagtaacatggtg gcagaattaa |
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Protein
| Protein ID | pfu_aug2.0_835.1_17876.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_835.1_17876.t1 MQRDFGEDSVACVCNSTYCDTVDANVRGDEGQYSLYLTDSVGDRIVHTYGSINSQNMGATTYTVNKNVTYQEIIGFGGAF TDAAGINIGKLSLGAQTNLLKSYYSPSGIEYNVGRIPMASCDFSTHPYSYDDSSGDFNLTKFALTQEDINYKEYAKHGIK LWGITGQNEPTDGNIFKFPFQAMGWTAEMQRDFIAKDLGPALEQNGLRHIKLMILDDSRLMLPYWPEKEYAKQGIKLWGI TGQNEPTDGNIFKFPFQAMGWTAEMQRDFIAKDLGPALEQNGLGHIKLMILDDSRLMLPYWPEKVFESKDASKYISGIAV HWYQDKFVPAAVLSITHKKFPDKFILATEACSGAAGPLDPVKVRLGNWERAEDYAHDIMQDLQNWVTGWTDWNIALDMQG GPNWVKNFVDSPVIVNSDKDEFYKQPMYYILGHFSKFIVPGSKRLDLTVKGSNKNVEVVAFLRPDSSIVAVLLNRSDEEV LVSLRDLDLGYINIDMIPHCIQTVTWWQN |
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